Molecular structure, bioinformatics analysis, expression and bioactivity of BAFF (TNF13B) in dog (Canis familiaris)

Vet Immunol Immunopathol. 2011 Jul 15;142(1-2):133-9. doi: 10.1016/j.vetimm.2011.04.014. Epub 2011 May 5.

Abstract

B cell activating factor (BAFF), belonging to the tumor necrosis factor (TNF) family, plays an important role in B cell survival, proliferation and differentiation. In the present study, we amplified the cDNA of dog (Canis familiaris) BAFF (designated doBAFF) from spleen by reverse transcription-PCR (RT-PCR) and rapid amplification of cDNA ends (RACE) strategies. The open reading frame (ORF) of doBAFF covers 879 bp encoding 292 amino acids, with a 152-aa mature peptide. The soluble mature part of doBAFF (dosBAFF) shares 91.5%, 72.1%, 96.7%, 94.0% and 91.5% identity with the human, mouse, cattle, pig and rabbit counterparts, respectively. The predicted three-dimensional (3D) structural analysis of dosBAFF analyzed by "comparative protein modeling" revealed that it was very similar to its human counterpart. Real-time quantitative PCR analysis revealed that doBAFF was mainly expressed in spleen. Two fusion proteins SUMO-dosBAFF and GFP/dosBAFF were efficiently expressed in Escherichia coli BL21 (DE3) and purified using metal chelate affinity chromatography (Ni-NTA). Laser scanning confocal microscopy analysis showed that GFP/dosBAFF could bind to the mouse splenic B-cell. In vitro, SUMO-dosBAFF and GFP/dosBAFF were able to promote the survival/proliferation of dog lymphocytes or mouse splenic B cells with/without anti-IgM. Therefore, BAFF may be a potential immunologic factor for enhancing immunological efficacy in dog.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • B-Cell Activating Factor / genetics*
  • B-Cell Activating Factor / metabolism
  • B-Cell Activating Factor / physiology
  • Base Sequence
  • Blotting, Western / veterinary
  • Cloning, Molecular
  • Dogs
  • Microscopy, Confocal / veterinary
  • Molecular Sequence Data
  • Open Reading Frames / genetics
  • Protein Structure, Tertiary
  • Reverse Transcriptase Polymerase Chain Reaction / veterinary
  • Spleen / metabolism

Substances

  • B-Cell Activating Factor

Associated data

  • GENBANK/FJ793193