Molecular characterization, chromosomal localization, expression profile and association analysis with carcass traits of the porcine dickkopf homolog1 gene

Mol Biol Rep. 2011 Mar;38(3):1929-34. doi: 10.1007/s11033-010-0313-x. Epub 2010 Sep 17.

Abstract

DKK1 (dickkopf homolog 1) is a potent inhibitor of the canonical Wnt/β-cantenin signalling pathway, which plays a pivotal role in myogenesis, adipogenesis, and many other crucial biological processes. In this study, DKK1 was assigned to porcine 14q25-26 by using the radiation hybrid (IMpRH) panel. A G1757A single nucleotide polymorphism site by Csp6I PCR-RFLP was identified. Association analysis showed that different genotypes were associated with loin muscle area (P = 0.0281). Semi-quantitative-RT-PCR analysis revealed that DKK1 was highly expressed in spleen and lymph node at two developmental stages, while in skeletal muscle, further real-time PCR quantified that DKK1 was down-regulated in Large White pigs compared to Tongcheng pigs, accompanied by the down-regulation of CTTNB1 and TCF4, the up-regulation of LRP6, suggesting that the phenotypic difference between lean and obese pigs might be correlated with the activity of Wnt/β-cantenin signalling pathway.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Chromosomes, Mammalian / genetics*
  • Computational Biology
  • Gene Expression Profiling*
  • Gene Expression Regulation
  • Genetic Association Studies*
  • Genotype
  • Intercellular Signaling Peptides and Proteins / chemistry
  • Intercellular Signaling Peptides and Proteins / genetics*
  • Intercellular Signaling Peptides and Proteins / metabolism
  • Meat*
  • Molecular Sequence Data
  • Muscle, Skeletal / metabolism
  • Phenotype
  • Phylogeny
  • Polymorphism, Single Nucleotide / genetics
  • Quantitative Trait, Heritable*
  • Sus scrofa / genetics*

Substances

  • Intercellular Signaling Peptides and Proteins