APOBEC-1 complementation factor (ACF) forms RNA-dependent multimers

Biochem Biophys Res Commun. 2010 Jul 16;398(1):38-43. doi: 10.1016/j.bbrc.2010.06.021. Epub 2010 Jun 10.

Abstract

Limited proteolysis of APOBEC-1 complementation factor (ACF) and computational secondary structure modeling were used to guide the construction of a well-folded, truncation protein spanning residues 1-320 and containing three RNA recognition motifs (RRMs). ACF320 bound preferentially to apoB mRNA and supported APOBEC-1 dependent editing at 40% of the activity of full length ACF. Live cell FRET and immunoprecipitation assays revealed that ACF320 formed homomultimers in situ that were bridged by RNA. Our study predicted that the C to U editosome may be assembled on the mooring sequence of apoB mRNA as a dimer of ACF bound to a dimer of APOBEC-1.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Apolipoproteins B / genetics
  • Cell Line
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Heterogeneous-Nuclear Ribonucleoproteins / chemistry*
  • Heterogeneous-Nuclear Ribonucleoproteins / genetics
  • Humans
  • Protein Multimerization*
  • Protein Structure, Tertiary
  • RNA / chemistry*
  • RNA Editing
  • Rats
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Trypsin / chemistry

Substances

  • APOBEC-1 complementation factor, rat
  • Apolipoproteins B
  • Heterogeneous-Nuclear Ribonucleoproteins
  • Recombinant Proteins
  • RNA
  • Trypsin