DNA helicase from calf thymus. Purification to apparent homogeneity and biochemical characterization of the enzyme

J Biol Chem. 1990 Aug 25;265(24):14347-54.

Abstract

We have purified a DNA helicase from calf thymus to apparent homogeneity by monitoring the activity with a strand displacement assay. DNA helicase followed the DNA polymerase alpha-primase complex through chromatography on phosphocellulose and hydroxylapatite. Separation from DNA polymerase alpha-primase complex as well as from the bulk of another DNA-dependent ATPase was achieved on heparin-Sepharose. Further purification steps included ATP-agarose and fast protein liquid chromatography-Mono S. A 47-kDa polypeptide cosedimented with the DNA helicase activity in a glycerol gradient as well as in gel filtration on Superose 6. The calf thymus DNA helicase had a sedimentation coefficient of 4-7 S and Stokes radius of about 45 A suggesting that the enzyme might be monomer in its functional form. DNA helicase activity requires a divalent cation with Mg2+ being more efficient than Mn2+ or Ca2+. Hydrolysis of ATP is required since the two nonhydrolyzable ATP analogs adenosine 5'-O-(3-thiotriphosphate) and adenylyl (beta, gamma-methylene)diphosphonate cannot substitute for ATP or dATP in the displacement reaction. Calf thymus DNA helicase is able to use ATP, dATP, dideoxy-ATP, CTP, and dCTP with Km for ATP and dATP of 0.2 and 0.25 mM, respectively. The enzyme can displace a fragment of 24 bases completely in an enzyme concentration- and time-dependent manner. The DNA helicase appears to bind to single-stranded DNA and to move to single-strand double-strand transition. The directionality of unwinding is 3'----5' with respect to the single-stranded DNA to which the enzyme is bound.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphatases / isolation & purification
  • Animals
  • Binding, Competitive
  • Cattle
  • Chromatography
  • Chromatography, Affinity
  • Chromatography, High Pressure Liquid
  • Chromatography, Ion Exchange
  • DNA Helicases / isolation & purification*
  • DNA Helicases / metabolism
  • DNA Primase
  • Durapatite
  • Hydroxyapatites
  • Kinetics
  • Nuclear Proteins / isolation & purification
  • Proliferating Cell Nuclear Antigen
  • RNA Nucleotidyltransferases / isolation & purification
  • Substrate Specificity
  • Thymus Gland / enzymology*

Substances

  • Hydroxyapatites
  • Nuclear Proteins
  • Proliferating Cell Nuclear Antigen
  • Durapatite
  • DNA Primase
  • RNA Nucleotidyltransferases
  • Adenosine Triphosphatases
  • DNA Helicases