Characterization of the 5' regulatory region of the human Glycine N-methyltransferase gene

Gene. 2009 Aug 15;443(1-2):151-7. doi: 10.1016/j.gene.2009.05.001. Epub 2009 May 8.

Abstract

Glycine N-methyltransferase (GNMT) is a tumor susceptibility gene for both hepatocellular carcinoma and prostate cancer. We have previously characterized GNMT genomic structure and mapped its chromosomal localization to 6p12. For this study we identified a GNMT transcriptional start site at the 14th position upstream of the ATG codon. Electrophoretic mobility shift assay results indicate binding of the nuclear factor-Y (NF-Y) transcription factor to the CCAAT box (-71/-67) of the GNMT gene. Mutation assay results suggest that the nucleotide sequence in the -56/-47 region is a binding site for a putative transcriptional factor. The TATA-less core promoter (-133/+14) contains three major elements: an Sp1 site, CCAAT box, and a novel box within the CTGTCGGCTG sequence. One functional xenobiotic response element (XRE) located at the -104/-82 region is inducable by benzo[a]pyrene treatment. We believe our results have value for the study of GNMT transcriptional regulation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • CCAAT-Binding Factor / metabolism
  • Electrophoretic Mobility Shift Assay
  • Glycine N-Methyltransferase / genetics*
  • Humans
  • Molecular Sequence Data
  • Promoter Regions, Genetic
  • Regulatory Sequences, Nucleic Acid*
  • Transcription Initiation Site

Substances

  • CCAAT-Binding Factor
  • GNMT protein, human
  • Glycine N-Methyltransferase