Identification of a Taq DNA polymerase inhibitor from the red seaweed Symphyocladia latiuscula

J Environ Biol. 2008 Jul;29(4):475-8.

Abstract

Two inhibitors of Taq DNA polymerase were isolated from the marine red alga Symphyocladia latiuscula. The inhibitors were purified by methanol extraction, molecular fractionation below 3000 MW and reverse-phase HPLC. The purified compound SL-1 containing three bromines was identified as 2,3,6-tribromo-4,5-dihydroxybenzyl alcohol (C7H5Br3O3: MW374) by NMR and MS analyses. The purified compound SL-2 was identified as 2,3, 6-tribromo-4,5-dihydroxybenzyl methyl ether(C8H7Br3O3: MW388). In a 25-microl reaction mixture containing 1.5 units of Taq DNA polymerase, the enzyme was completely inhibited by 0.5 microg SL-1 or 5 microg SL-2.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Chromatography, High Pressure Liquid
  • Electrophoresis, Agar Gel
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / isolation & purification*
  • Enzyme Inhibitors / pharmacology*
  • Ethers
  • Hydrocarbons, Brominated / chemistry
  • Hydrocarbons, Brominated / isolation & purification*
  • Hydrocarbons, Brominated / pharmacology*
  • Methanol / chemistry
  • Molecular Weight
  • Polymerase Chain Reaction
  • Rhodophyta / chemistry*
  • Spectrum Analysis
  • Taq Polymerase / antagonists & inhibitors*

Substances

  • 2,3,6-tribromo-4,5-dihydroxybenzyl methyl ether
  • Enzyme Inhibitors
  • Ethers
  • Hydrocarbons, Brominated
  • Taq Polymerase
  • Methanol