Human 1A6/DRIM, the homolog of yeast Utp20, functions in the 18S rRNA processing

Biochim Biophys Acta. 2007 Jun;1773(6):863-8. doi: 10.1016/j.bbamcr.2007.04.002. Epub 2007 Apr 12.

Abstract

1A6/DRIM is a nucleolar protein with a nucleolar targeting sequence in its 3'-terminus. Bioinformatic analysis indicated that human 1A6/DRIM shares 23% identity and 43% similarity with yeast Utp20, which has been reported as a component of U3 snoRNA protein complex and has been implicated in 18S rRNA processing. In the present study, we found, by utilizing RT-PCR with RNA extracted from anti-1A6/DRIM immunoprecipitates and Northern blotting, that 1A6/DRIM is associated with U3 snoRNA. Pulse-chase labeling assays showed that silencing of 1A6/DRIM expression in HeLa cells resulted in a delayed 18S rRNA processing. Furthermore, immunoprecipitations revealed that 1A6/DRIM was also associated with fibrillarin, another U3 RNP component in HeLa cells. These results indicate that 1A6/DRIM is involved in 18S rRNA processing and is the bona fide mammalian Utp20.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chromosomal Proteins, Non-Histone / metabolism
  • Gene Silencing
  • HeLa Cells
  • Humans
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism*
  • RNA Processing, Post-Transcriptional / physiology*
  • RNA, Ribosomal, 18S / metabolism*
  • RNA, Small Nucleolar / metabolism*
  • Ribonucleoproteins / genetics
  • Ribonucleoproteins / metabolism
  • Saccharomyces cerevisiae Proteins / genetics
  • Sequence Homology, Amino Acid

Substances

  • Chromosomal Proteins, Non-Histone
  • Nuclear Proteins
  • RNA, Ribosomal, 18S
  • RNA, Small Nucleolar
  • RNA, U3 small nucleolar
  • Ribonucleoproteins
  • Saccharomyces cerevisiae Proteins
  • UTP20 protein, human
  • fibrillarin