Identification of a second G-C-rich promoter conserved in the human, murine and rat tumor suppressor genes HIC1

Oncogene. 2004 May 13;23(22):4023-31. doi: 10.1038/sj.onc.1207504.

Abstract

The BTB/POZ transcriptional repressor HIC1 (Hypermethylated in Cancer 1) is a tumor suppressor gene located at chromosome 17p13.3, a region frequently hypermethylated or deleted in human tumors and in a contiguous-gene syndrome, the Miller-Dieker syndrome. The human and murine HIC1 genes are composed of two alternative 5' exons, 1a and 1b fused to a large second coding exon 2. Exon 1a is a noncoding exon associated with a major G-C-rich promoter whereas exon 1b is a downstream coding exon associated with a minor TATA box promoter. By human-mouse genome comparison, we have identified a short upstream conserved sequence containing G-C boxes which were shown to be functional. Transcripts initiating from this new promoter were detected in various human and mouse tissues and contained a long 5'-UTR sequence, called 1c which encompass the G-C-rich promoter associated with exon 1a and uses the same splice donor site. RT-PCR analyses of two primary breast epithelial cell lines identified two other 5'-UTRs generated by alternative splicing within exon 1c. Our results thus highlight the existence of an unexpected complex transcriptional regulation of HIC1.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Base Sequence
  • Conserved Sequence*
  • Female
  • Genes, Tumor Suppressor*
  • Humans
  • Kruppel-Like Transcription Factors
  • Mice
  • Molecular Sequence Data
  • Ovary / metabolism
  • Promoter Regions, Genetic*
  • Rabbits
  • Rats
  • Transcription Factors / genetics*

Substances

  • Hic1 protein, mouse
  • Kruppel-Like Transcription Factors
  • Transcription Factors

Associated data

  • GENBANK/AJ414163
  • GENBANK/AJ550616
  • GENBANK/AJ583594
  • GENBANK/AJ583693
  • GENBANK/AJ585343