Identification and characterisation of the gene TWIST NEIGHBOR (TWISTNB) located in the microdeletion syndrome 7p21 region

Cytogenet Genome Res. 2002;97(3-4):167-70. doi: 10.1159/000066618.

Abstract

We have characterised a 2.4-Mb genomic sequence of a smallest region of overlap (SRO) deleted in the human microdeletion syndrome 7p21 by in silico analysis. Patients harbouring this minimal deletion present in addition to the clinical features of Saethre-Chotzen syndrome (MIM 101400) a distinct learning disability. This genomic region shows a very low gene content. Besides the transcription factor gene TWIST, the Histone Deacetylase 9 (HDAC9), Sorting Nexin 13 (SNX13) and an evolutionarily conserved bHLH transcription factor gene Nephew of Atonal 3 (HNATO3) have been detected previously. Here we describe the localisation and characterisation of the TWIST NEIGHBOR (TWISTNB) gene. Comparison of the predicted proteins of human TWISTNB and mouse Twistnb shows a high degree of conservation. Northern blot analysis of human fetal and adult tissues shows ubiquitous expression in all tissues tested.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acrocephalosyndactylia / genetics*
  • Amino Acid Sequence
  • Base Sequence
  • Blotting, Northern
  • Chromosome Deletion*
  • Chromosomes, Human, Pair 7*
  • DNA Primers
  • Humans
  • Molecular Sequence Data
  • Proteins / chemistry
  • Proteins / genetics*
  • Sequence Homology, Amino Acid

Substances

  • DNA Primers
  • POLR1F protein, human
  • Proteins

Associated data

  • GENBANK/BK000492
  • GENBANK/BK000493