Characterization of DNA synthesis catalyzed by bacteriophage T4 replication complexes reconstituted on synthetic circular substrates

Nucleic Acids Res. 2002 Oct 15;30(20):4387-97. doi: 10.1093/nar/gkf576.

Abstract

Replication complexes were reconstituted using the eight purified bacteriophage T4 replication proteins and synthetic circular 70-, 120- or 240-nt DNA substrates annealed to a leading-strand primer. To differentiate leading strands from lagging strands, the circular parts of the substrates lacked dCMP; thus, no dCTP was required for leading-strand synthesis and no dGTP for lagging-strand synthesis. The size of the substrates was crucial, the longer substrates supporting much more DNA synthesis. Leading and lagging strands were synthesized in a coupled manner. Specifically targeting leading-strand synthesis by decreasing the concentration of dGTP decreased the rate of extension of leading strands. However, blocking lagging-strand synthesis by lowering the dCTP concentration, by omitting dCTP altogether, by adding ddCTP, or with a single abasic site had no immediate effect on the rate of extension of leading strands.

MeSH terms

  • Bacteriophage T4 / enzymology
  • Bacteriophage T4 / genetics*
  • Catalysis
  • DNA Replication*
  • DNA, Circular / biosynthesis*
  • Deoxycytosine Nucleotides / metabolism
  • Kinetics
  • Macromolecular Substances
  • Models, Genetic
  • Substrate Specificity
  • Viral Proteins / metabolism
  • Virus Replication

Substances

  • DNA, Circular
  • Deoxycytosine Nucleotides
  • Macromolecular Substances
  • Viral Proteins
  • 2'-deoxycytidine 5'-triphosphate