Human orthologs of yeast vacuolar protein sorting proteins Vps26, 29, and 35: assembly into multimeric complexes

Mol Biol Cell. 2000 Dec;11(12):4105-16. doi: 10.1091/mbc.11.12.4105.

Abstract

Sorting nexin (SNX) 1 and SNX2 are mammalian orthologs of Vps5p, a yeast protein that is a subunit of a large multimeric complex, termed the retromer complex, involved in retrograde transport of proteins from endosomes to the trans-Golgi network. We report the cloning and characterization of human orthologs of three additional components of the complex: Vps26p, Vps29p, and Vps35p. The close structural similarity between the yeast and human proteins suggests a similarity in function. We used both yeast two-hybrid assays and expression in mammalian cells to define the binding interactions among these proteins. The data suggest a model in which hVps35 serves as the core of a multimeric complex by binding directly to hVps26, hVps29, and SNX1. Deletional analyses of hVps35 demonstrate that amino acid residues 1-53 and 307-796 of hVps35 bind to the coiled coil-containing domain of SNX1. In contrast, hVps26 binds to amino acid residues 1-172 of hVps35, whereas hVps29 binds to amino acid residues 307-796 of hVps35. Furthermore, hVps35, hVps29, and hVps26 have been found in membrane-associated and cytosolic compartments. Gel filtration chromatography of COS7 cell cytosol showed that both recombinant and endogenous hVps35, hVps29, and hVps26 coelute as a large complex ( approximately 220-440 kDa). In the absence of hVps35, neither hVps26 nor hVps29 is found in the large complex. These data provide the first insights into the binding interactions among subunits of a putative mammalian retromer complex.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • COS Cells
  • Carrier Proteins / genetics*
  • Carrier Proteins / metabolism*
  • Cloning, Molecular
  • Humans
  • Macromolecular Substances
  • Membrane Proteins / genetics*
  • Models, Biological
  • Molecular Sequence Data
  • Saccharomyces / genetics
  • Saccharomyces cerevisiae Proteins*
  • Sequence Homology
  • Two-Hybrid System Techniques
  • Vesicular Transport Proteins*

Substances

  • Carrier Proteins
  • Macromolecular Substances
  • Membrane Proteins
  • Saccharomyces cerevisiae Proteins
  • VPS26A protein, human
  • VPS29 protein, human
  • VPS35 protein, S cerevisiae
  • VPS35 protein, human
  • Vesicular Transport Proteins

Associated data

  • GENBANK/AF175264
  • GENBANK/AF175265
  • GENBANK/AF175266