Cloning, characterization and chromosomal assignment of NBC4, a new member of the sodium bicarbonate cotransporter family

Biochim Biophys Acta. 2000 Sep 7;1493(1-2):215-8. doi: 10.1016/s0167-4781(00)00149-4.

Abstract

We report the cloning, characterization and chromosomal assignment of a new member of the sodium bicarbonate cotransporter (NBC) family, NBC4, from human heart. NBC4 maps to chromosome 2p13 and is a new candidate gene for Alstrom syndrome. NBC4 encodes a 1074-residue polypeptide with 12 putative membrane-spanning domains. Unlike other members of the NBC family, NBC4 has a unique glycine-rich region (amino acids 438-485). In addition, NBC4 lacks the lysine-rich C-terminus of NBC1 with which it is most homologous. The first of two putative stilbene binding motifs (K(M/L)(X)K) is lacking in NBC4 (amino acids 655-658). The approximately 6 kb NBC4 transcript is moderately expressed in heart, with the highest expression in liver, testes and spleen.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Bicarbonates / metabolism
  • Binding Sites
  • Carrier Proteins / chemistry
  • Carrier Proteins / genetics*
  • Chromosome Mapping
  • Cloning, Molecular
  • Diabetes Mellitus, Type 2 / genetics
  • Hearing Loss, Sensorineural / genetics
  • Humans
  • Hydrogen-Ion Concentration
  • Membrane Proteins / metabolism*
  • Molecular Sequence Data
  • Myocardium / metabolism*
  • Obesity / genetics
  • Protein Structure, Secondary
  • Sequence Alignment
  • Sodium-Bicarbonate Symporters
  • Syndrome

Substances

  • Bicarbonates
  • Carrier Proteins
  • Membrane Proteins
  • Sodium-Bicarbonate Symporters

Associated data

  • GENBANK/AF207661