Computer sequence analysis of human highly conserved zinc finger modules

DNA Seq. 1998;9(3):163-9. doi: 10.3109/10425179809072191.

Abstract

We defined a sub-family of zinc finger proteins by computer analyses and comparisons of five new finger domains against protein databases. This subclass of the cysteine-cysteine/histidine-histidine motif shows additional well conserved amino acid patterns and belongs to the human kox and gli-Kruppel gene family, sharing also the same stretches of regulatory zinc finger-containing proteins of mouse and Xenopus. We particularly describe ZF6 cDNA which contains the most interesting sequence, encoding a putative multi-domain regulatory protein.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Conserved Sequence
  • DNA, Complementary / genetics
  • Databases, Factual
  • Humans
  • Mice
  • Molecular Sequence Data
  • Multigene Family
  • Phylogeny
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Species Specificity
  • Xenopus laevis
  • Zinc Fingers / genetics*

Substances

  • DNA, Complementary

Associated data

  • GENBANK/U71363
  • GENBANK/U71598
  • GENBANK/U71599
  • GENBANK/U71600
  • GENBANK/U71601