Conservation of sequence and structure flanking the mouse and human beta-globin loci: the beta-globin genes are embedded within an array of odorant receptor genes

Proc Natl Acad Sci U S A. 1999 Apr 27;96(9):5129-34. doi: 10.1073/pnas.96.9.5129.

Abstract

In mouse and human, the beta-globin genes reside in a linear array that is associated with a positive regulatory element located 5' to the genes known as the locus control region (LCR). The sequences of the mouse and human beta-globin LCRs are homologous, indicating conservation of an essential function in beta-globin gene regulation. We have sequenced regions flanking the beta-globin locus in both mouse and human and found that homology associated with the LCR is more extensive than previously known, making up a conserved block of approximately 40 kb. In addition, we have identified DNaseI-hypersensitive sites within the newly sequenced regions in both mouse and human, and these structural features also are conserved. Finally, we have found that both mouse and human beta-globin loci are embedded within an array of odorant receptor genes that are expressed in olfactory epithelium, and we also identify an olfactory receptor gene located 3' of the beta-globin locus in chicken. The data demonstrate an evolutionarily conserved genomic organization for the beta-globin locus and suggest a possible role for the beta-globin LCR in control of expression of these odorant receptor genes and/or the presence of mechanisms to separate regulatory signals in different tissues.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Conserved Sequence*
  • Gene Expression Regulation
  • Globins / genetics*
  • Humans
  • Mice
  • Molecular Sequence Data
  • Phylogeny
  • Receptors, Odorant / genetics*
  • Sequence Analysis, DNA
  • Sequence Homology, Nucleic Acid

Substances

  • Receptors, Odorant
  • Globins

Associated data

  • GENBANK/AF071080
  • GENBANK/AF133300
  • GENBANK/AF137131
  • GENBANK/AF137396