LOCUS YP_001328683 1116 aa linear BCT 28-JUL-2008
DEFINITION DNA polymerase III, alpha subunit [Sinorhizobium medicae WSM419].
ACCESSION YP_001328683
VERSION YP_001328683.1 GI:150398216
DBSOURCE REFSEQ: accession NC_009636.1
KEYWORDS .
SOURCE Sinorhizobium medicae WSM419
ORGANISM Sinorhizobium medicae WSM419
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
REFERENCE 1 (residues 1 to 1116)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M.,
Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
Mikhailova,N., Reeve,W. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Sinorhizobium medicae WSM419 chromosome
JOURNAL Unpublished
REFERENCE 2 (residues 1 to 1116)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (03-JUL-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 1116)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M.,
Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
Mikhailova,N., Reeve,W. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from ABR61848.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..1116
/organism="Sinorhizobium medicae WSM419"
/strain="WSM419"
/db_xref="taxon:366394"
Protein 1..1116
/product="DNA polymerase III, alpha subunit"
/EC_number="2.7.7.7"
/calculated_mol_wt=124811
CDS 1..1116
/locus_tag="Smed_3021"
/coded_by="complement(NC_009636.1:3169083..3172433)"
/note="TIGRFAM: DNA polymerase III, alpha subunit;
PFAM: PHP domain protein; nucleic acid binding OB-fold
tRNA/helicase-type; DNA polymerase III alpha subunit;
KEGG: sme:SMc03788 putative DNA polymerase III alpha chain
protein"
/transl_table=11
/db_xref="InterPro:IPR004013"
/db_xref="InterPro:IPR004365"
/db_xref="InterPro:IPR004805"
/db_xref="InterPro:IPR011708"
/db_xref="GeneID:5323899"
ORIGIN
1 msgdtafyel gactnfsfle gaapaeemvv fakkarlagl giadrnsvag vvrahakakm
61 enypfqpgar lvfadgtpdv layprnrrgw ghlcrllsag nlrskkgdct lhladllewq
121 eelllivmpd rvrpepeslk pllgklqeha gnrlylglap rydgfdrhdf avlatvarka
181 gigllatnda lyhdpdyrpl advvtaireh vpvagagfll qknaerhlks premarlfsd
241 ypeaiantqk ffrhlafsld elrhqypden aggetpaesl rrlvsegaae rypegvpekv
301 qrqieyelel indkkyepyf ltvhklvkfa rsekilcqgr gsaanssvcf clgitdvdpq
361 kftllfdrfl skdrdeppdi dvdfeherre eviqyiyrty gkehaglaaa visyrsrsag
421 revakafgfs edvqsalvss iwgwgnspft eeqargagld aadpstrrvl ayasllmnyp
481 rhlsqhvggf vitrdrldev vpimntampd rymiewdkdd ldelkilkvd vlalgmltcl
541 akgfklleah ygepitlaei yqdhqpavyd micradtvgv fqiesraqms mlprlqprem
601 ydlvievaiv rpgpiqgnmv hpylkrregq rkgekvkyps pelkavlert lgvplfqeqa
661 mqiaitaagf spseadrlrr amatfkrtgt ihtferkmve gmvangyere faercfnqik
721 gfgeygfpes haasfaslvy asawlktyyp difcaallna qpmgfyapaq lvrdarehgv
781 kvlpvdinhs dwdallegeg qfrkesvdpr hadmrevikt rkavrlgfrl vkglkqadmg
841 alvacrgegy rsvhdlwfrs glsrsvlerl adadafrslg ldrraalwav kaldeqsave
901 rlplfegags ldlraepkva lpempageqv ihdyrtltls lkahpvsfmr edfsrtgilr
961 srdlaatatg kwvtvaglvl vrqrpgsang vifmtiedet gianiivwek tfrkyrpqvm
1021 gsrlvkirgr lqnqsgvihv vadhleditp mlgllrrear rfgandradg alrpsgdare
1081 krklrqlrlg lpggaepege aaaqvaeamp kgrnfh
//