LOCUS NP_416386 809 aa linear BCT 17-MAY-2008
DEFINITION trimethylamine N-oxide reductase system III, catalytic subunit
[Escherichia coli str. K-12 substr. MG1655].
ACCESSION NP_416386
VERSION NP_416386.4 GI:90111350
DBSOURCE REFSEQ: accession NC_000913.2
KEYWORDS .
SOURCE Escherichia coli str. K12 substr. MG1655
ORGANISM Escherichia coli str. K12 substr. MG1655
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Enterobacteriaceae; Escherichia.
REFERENCE 1 (residues 1 to 809)
AUTHORS Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R.,
Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T.,
Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H.,
Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L.
TITLE Escherichia coli K-12: a cooperatively developed annotation
snapshot--2005
JOURNAL Nucleic Acids Res. 34 (1), 1-9 (2006)
PUBMED 16397293
REMARK Publication Status: Online-Only
REFERENCE 2 (residues 1 to 809)
AUTHORS Blattner,F.R., Plunkett,G., Bloch,C.A., Perna,N.T., Burland,V.,
Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F.,
Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J.,
Mau,B. and Shao,Y.
TITLE The complete genome sequence of Escherichia coli K-12
JOURNAL Science 277 (5331), 1453-1474 (1997)
PUBMED 9278503
REFERENCE 3 (residues 1 to 809)
AUTHORS Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y.,
Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T.,
Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and
Wanner,B.L.
TITLE Workshop on Annotation of Escherichia coli K-12
JOURNAL Unpublished
REMARK Woods Hole, Mass., on 14-18 November 2003 (sequence corrections)
REFERENCE 4 (residues 1 to 809)
AUTHORS Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D.,
Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H.
TITLE ASAP: Escherichia coli K-12 strain MG1655 version m56
JOURNAL Unpublished
REMARK ASAP download 10 June 2004 (annotation updates)
REFERENCE 5 (residues 1 to 809)
AUTHORS Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T.
TITLE A more accurate sequence comparison between genomes of Escherichia
coli K12 W3110 and MG1655 strains
JOURNAL Unpublished
REMARK GenBank accessions AG613214 to AG613378 (sequence corrections)
REFERENCE 6 (residues 1 to 809)
AUTHORS Perna,N.T.
TITLE Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic
sequence correction
JOURNAL Unpublished
REMARK GenBank accession AY605712 (sequence corrections)
REFERENCE 7 (residues 1 to 809)
AUTHORS Rudd,K.E.
TITLE A manual approach to accurate translation start site annotation: an
E. coli K-12 case study
JOURNAL Unpublished
REFERENCE 8 (residues 1 to 809)
AUTHORS Rudd,K.E.
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2008) Department of Biochemistry and Molecular
Biology, University of Miami Miller School of Medicine, 118 Gautier
Bldg., Miami, FL 33136, USA
REMARK Annotation update from ecogene.org as a multi-database
collaboration
REFERENCE 9 (residues 1 to 809)
AUTHORS Rudd,K.E.
TITLE Direct Submission
JOURNAL Submitted (26-SEP-2007) Department of Biochemistry and Molecular
Biology, University of Miami Miller School of Medicine, 118 Gautier
Bldg., Miami, FL 33136, USA
REMARK Annotation update from ecogene.org as a multi-database
collaboration
REFERENCE 10 (residues 1 to 809)
AUTHORS Rudd,K.E.
TITLE Direct Submission
JOURNAL Submitted (24-APR-2007) Department of Biochemistry and Molecular
Biology, University of Miami Miller School of Medicine, 118 Gautier
Bldg., Miami, FL 33136, USA
REMARK Annotation update from ecogene.org as a multi-database
collaboration
REFERENCE 11 (residues 1 to 809)
AUTHORS Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (07-FEB-2006) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Protein updates by submitter
REFERENCE 12 (residues 1 to 809)
AUTHORS Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (10-JUN-2004) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Sequence update by submitter
REFERENCE 13 (residues 1 to 809)
AUTHORS Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (13-OCT-1998) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REFERENCE 14 (residues 1 to 809)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (02-SEP-1997) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REFERENCE 15 (residues 1 to 809)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (16-JAN-1997) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AAC74942.
On Mar 21, 2006 this sequence version replaced gi:49176162.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..809
/organism="Escherichia coli str. K12 substr. MG1655"
/strain="K-12"
/sub_strain="MG1655"
/db_xref="taxon:511145"
Protein 1..809
/product="trimethylamine N-oxide reductase system III,
catalytic subunit"
/EC_number="1.6.6.9"
/function="enzyme; Central intermediary metabolism"
/calculated_mol_wt=88833
mat_peptide 32..809
/product="trimethylamine N-oxide reductase system III,
catalytic subunit"
/experiment="N-terminus verified by Edman degradation:
PMID 11004177"
/calculated_mol_wt=85746
CDS 1..809
/gene="torZ"
/locus_tag="b1872"
/gene_synonym="ECK1873"
/gene_synonym="bisZ"
/gene_synonym="JW1861"
/coded_by="complement(NC_000913.2:1952602..1955031)"
/GO_component="cytoplasm"
/GO_function="electron acceptor activity"
/transl_table=11
/db_xref="ASAP:ABE-0006244"
/db_xref="UniProtKB/Swiss-Prot:P46923"
/db_xref="ECOCYC:G7022"
/db_xref="EcoGene:EG13276"
/db_xref="GeneID:946389"
ORIGIN
1 mtltrrefik hsgiaagalv vtsaaplpaw aeekggkilt agrwgamnve vkdgkivsst
61 galaktipns lqstaadqvh ttariqhpmv rksyldnplq pakgrgedty vqvsweqalk
121 liheqhdrir kangpsaifa gsygwrssgv lhkaqtllqr ymnlaggysg hsgdystgaa
181 qvimphvvgs vevyeqqtsw plilensqvv vlwgmnplnt lkiawsstde qgleyfhqlk
241 ksgkpviaid pirsetieff ddnatwiapn mgtdvalmlg iahtlmtqgk hdkvflekyt
301 tgypqfeeyl tgksdntpks avwaaeitgv peaqivklae lmaanrtmlm agwgiqrqqy
361 geqkhwmlvt laamlgqigt pgggfgfsyh ysnggnptrv ggvlpemsaa iaghaseaad
421 dggmtaipva rivdalenpg gkyqhngkeq typnikmiww agggnfthhq dtnrlikawq
481 kpemivvsec ywtaaakhad ivlpittsfe rndltmtgdy snqhivpmkq avapqfearn
541 dfdvfadlae llkpggkeiy tegkdemawl kffydaaqkg araqrvtmpm fnafwqqnkl
601 iemrhsekne qyvrygdfra dpvknalgtp sgkieiyskt lekfgykdcp ahptwlapde
661 wkgtadekql qlltahpahr lhsqlnyael rkkyaiadre pitihtedaa rfgiangdlv
721 rvwnkrgqil tgavvtdgik kgvvcvhega wpdlenglck ngsanvltad ipssqlanac
781 agnsalvyie kytgnapklt afdqpavqa
//