LOCUS NP_174302 589 aa linear PLN 22-MAY-2008
DEFINITION NCED5 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5) [Arabidopsis
thaliana].
ACCESSION NP_174302
VERSION NP_174302.1 GI:15220654
DBSOURCE REFSEQ: accession NM_102749.2
KEYWORDS .
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AT1G30100.1p.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..589
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
Protein 1..589
/product="NCED5 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5)"
/calculated_mol_wt=65206
CDS 1..589
/gene="NCED5"
/locus_tag="AT1G30100"
/gene_synonym="9-cis epoxycarotenoid dioxygenase 5"
/gene_synonym="ATNCED5"
/gene_synonym="NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5"
/gene_synonym="T2H7.10"
/gene_synonym="T2H7_10"
/coded_by="NM_102749.2:44..1813"
/note="Identical to Probable 9-cis-epoxycarotenoid
dioxygenase NCED5, chloroplast precursor (NCED5)
[Arabidopsis Thaliana] (GB:Q9C6Z1); similar to NCED3
(NINE-CIS-EPOXYCAROTENOID DIOXYGENASE3) [Arabidopsis
thaliana] (TAIR:AT3G14440.1); similar to NCED2
(NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2) [Arabidopsis
thaliana] (TAIR:AT4G18350.1); similar to NCED9
(NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9) [Arabidopsis
thaliana] (TAIR:AT1G78390.1); similar to
9-cis-epoxycarotenoid dioxygenase [Citrus sinensis]
(GB:BAE92961.1); similar to 9-cis-epoxycarotenoid
dioxygenase 2 [Citrus sinensis] (GB:AAY89371.1); similar
to 9-cis-epoxycarotenoid dioxygenase 5 [Citrus clementina]
(GB:ABC26010.1); contains InterPro domain Carotenoid
oxygenase (InterPro:IPR004294)"
/db_xref="GeneID:839889"
/db_xref="TAIR:AT1G30100"
ORIGIN
1 macsyiltpn ptklnlsfap sdldapspss svsftntkpr rrklsansvs dtpnllnfpn
61 ypspnpiipe kdtsrwnplq raasaaldfa etallrrers kplpktvdpr hqisgnyapv
121 peqsvkssls vdgkipdcid gvylrnganp lfepvsghhl fdgdgmvhav kitngdasys
181 crfteterlv qekqlgspif pkaigelhgh sgiarlmlfy arglfgllnh kngtgvanag
241 lvyfhdrlla mseddlpyqv rvtdngdlet igrfdfdgql ssamiahpki dpvtkelfal
301 sydvvkkpyl kyfkfspege kspdveipla sptmmhdfai tenfvvipdq qvvfklsdmf
361 lgkspvkydg ekisrfgilp rnakdasemv wvespetfcf hlwnawespe tdevvvigsc
421 mtpadsifne cdeqlnsvls eirlnlktgk strrtiipgs vqmnleagmv nrnllgrktr
481 yaylaiaepw pkvsgfakvd lstgevknhf yggkkyggep fflprglesd geddgyimsf
541 vhdeeswese lhivnavtle leatvklpsr vpygfhgtfv nsadmlnqa
//