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1:  NP_172331Reports  NPQ1 (NON-PHOTOCH...[gi:15223260] BLink, Conserved Domains, Links
LOCUS       NP_172331                462 aa            linear   PLN 22-MAY-2008
DEFINITION  NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1) [Arabidopsis thaliana].
ACCESSION   NP_172331
VERSION     NP_172331.1  GI:15223260
DBSOURCE    REFSEQ: accession NM_100728.3
KEYWORDS    .
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
            rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AT1G08550.1p.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     Protein         1..462
                     /product="NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1)"
                     /calculated_mol_wt=51886
     CDS             1..462
                     /gene="NPQ1"
                     /locus_tag="AT1G08550"
                     /gene_synonym="AVDE1"
                     /gene_synonym="F22O13.3"
                     /gene_synonym="F22O13_3"
                     /gene_synonym="NON-PHOTOCHEMICAL QUENCHING 1"
                     /gene_synonym="VIOLAXANTHIN DE-EPOXIDASE PRECURSOR"
                     /coded_by="NM_100728.3:244..1632"
                     /note="Identical to Violaxanthin de-epoxidase, chloroplast
                     precursor (VDE1) [Arabidopsis Thaliana]
                     (GB:Q39249;GB:Q9SJD9); similar to violaxanthin
                     de-epoxidase-related [Arabidopsis thaliana]
                     (TAIR:AT2G21860.1); similar to violaxanthin de-epoxidase
                     [Coffea arabica] (GB:ABB70816.1); similar to violaxanthin
                     deepoxidase [Chrysanthemum x morifolium] (GB:BAE79554.1);
                     similar to unnamed protein product [Vitis vinifera]
                     (GB:CAO70809.1); contains InterPro domain Lipocalin;
                     (InterPro:IPR002345); contains InterPro domain
                     Violaxanthin de-epoxidase (InterPro:IPR010788); contains
                     InterPro domain Calycin-like (InterPro:IPR011038);
                     contains InterPro domain Calycin; (InterPro:IPR012674)"
                     /db_xref="GeneID:837377"
                     /db_xref="TAIR:AT1G08550"
ORIGIN      
        1 mavathcfts pchdrirffs sddgigrlgi trkringtfl lkilppiqsa dlrttggrss
       61 rplsafrsgf skgifdivpl psknelkelt aplllklvgv lacaflivps adavdalktc
      121 acllkgcrie lakcianpac aanvaclqtc nnrpdetecq ikcgdlfens vvdefnecav
      181 srkkcvprks dlgefpapdp svlvqnfnis dfngkwyits glnptfdafd cqlhefhteg
      241 dnklvgnisw riktldsgff trsavqkfvq dpnqpgvlyn hdneylhyqd dwyilsskie
      301 nkpedyifvy yrgrndawdg yggavvytrs svlpnsiipe lekaaksigr dfstfirtdn
      361 tcgpepalve riektveege riivkeveei eeevekevek vgrtemtlfq rlaegfnelk
      421 qdeenfvrel skeemeflde ikmeasevek lfgkalpirk vr
//

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Last update: Wed, 05 Nov 2008 Rev. 145015