LOCUS NP_001066305 309 aa linear PLN 14-FEB-2008
DEFINITION Os12g0178100 [Oryza sativa (japonica cultivar-group)].
ACCESSION NP_001066305
VERSION NP_001066305.1 GI:115487636
DBSOURCE REFSEQ: accession NM_001072837.1
KEYWORDS .
SOURCE Oryza sativa Japonica Group
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
REFERENCE 1
AUTHORS Ohyanagi,H., Tanaka,T., Sakai,H., Shigemoto,Y., Yamaguchi,K.,
Habara,T., Fujii,Y., Antonio,B.A., Nagamura,Y., Imanishi,T.,
Ikeo,K., Itoh,T., Gojobori,T. and Sasaki,T.
TITLE The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa
ssp. japonica genome information
JOURNAL Nucleic Acids Res. 34 (DATABASE ISSUE), D741-D744 (2006)
PUBMED 16381971
REFERENCE 2
AUTHORS Matsumoto,T., Wu,J., Kanamori,H., Katayose,Y., Fujisawa,M.,
Namiki,N., Mizuno,H., Yamamoto,K., Antonio,B.A., Baba,T.,
Sakata,K., Nagamura,Y., Aoki,H., Arikawa,K., Arita,K., Bito,T.,
Chiden,Y., Fujitsuka,N., Fukunaka,R., Hamada,M., Harada,C.,
Hayashi,A., Hijishita,S., Honda,M., Hosokawa,S., Ichikawa,Y.,
Idonuma,A., Iijima,M., Ikeda,M., Ikeno,M., Ito,K., Ito,S., Ito,T.,
Ito,Y., Ito,Y., Iwabuchi,A., Kamiya,K., Karasawa,W., Kurita,K.,
Katagiri,S., Kikuta,A., Kobayashi,H., Kobayashi,N., Machita,K.,
Maehara,T., Masukawa,M., Mizubayashi,T., Mukai,Y., Nagasaki,H.,
Nagata,Y., Naito,S., Nakashima,M., Nakama,Y., Nakamichi,Y.,
Nakamura,M., Meguro,A., Negishi,M., Ohta,I., Ohta,T., Okamoto,M.,
Ono,N., Saji,S., Sakaguchi,M., Sakai,K., Shibata,M., Shimokawa,T.,
Song,J., Takazaki,Y., Terasawa,K., Tsugane,M., Tsuji,K., Ueda,S.,
Waki,K., Yamagata,H., Yamamoto,M., Yamamoto,S., Yamane,H.,
Yoshiki,S., Yoshihara,R., Yukawa,K., Zhong,H., Yano,M., Yuan,Q.,
Ouyang,S., Liu,J., Jones,K.M., Gansberger,K., Moffat,K., Hill,J.,
Bera,J., Fadrosh,D., Jin,S., Johri,S., Kim,M., Overton,L.,
Reardon,M., Tsitrin,T., Vuong,H., Weaver,B., Ciecko,A., Tallon,L.,
Jackson,J., Pai,G., Aken,S.V., Utterback,T., Reidmuller,S.,
Feldblyum,T., Hsiao,J., Zismann,V., Iobst,S., de Vazeille,A.R.,
Buell,C.R., Ying,K., Li,Y., Lu,T., Huang,Y., Zhao,Q., Feng,Q.,
Zhang,L., Zhu,J., Weng,Q., Mu,J., Lu,Y., Fan,D., Liu,Y., Guan,J.,
Zhang,Y., Yu,S., Liu,X., Zhang,Y., Hong,G., Han,B., Choisne,N.,
Demange,N., Orjeda,G., Samain,S., Cattolico,L., Pelletier,E.,
Couloux,A., Segurens,B., Wincker,P., D'Hont,A., Scarpelli,C.,
Weissenbach,J., Salanoubat,M., Quetier,F., Yu,Y., Kim,H.R.,
Rambo,T., Currie,J., Collura,K., Luo,M., Yang,T., Ammiraju,J.S.S.,
Engler,F., Soderlund,C., Wing,R.A., Palmer,L.E., de la Bastide,M.,
Spiegel,L., Nascimento,L., Zutavern,T., O'Shaughnessy,A., Dike,S.,
Dedhia,N., Preston,R., Balija,V., McCombie,W.R., Chow,T., Chen,H.,
Chung,M., Chen,C., Shaw,J., Wu,H., Hsiao,K., Chao,Y., Chu,M.,
Cheng,C., Hour,A., Lee,P., Lin,S., Lin,Y., Liou,J., Liu,S.,
Hsing,Y., Raghuvanshi,S., Mohanty,A., Bharti,A.K., Gaur,A.,
Gupta,V., Kumar,D., Ravi,V., Vij,S., Kapur,A., Khurana,P.,
Khurana,P., Khurana,J.P., Tyagi,A.K., Gaikwad,K., Singh,A.,
Dalal,V., Srivastava,S., Dixit,A., Pal,A.K., Ghazi,I.A., Yadav,M.,
Pandit,A., Bhargava,A., Sureshbabu,K., Batra,K., Sharma,T.R.,
Mohapatra,T., Singh,N.K., Messing,J., Nelson,A.B., Fuks,G.,
Kavchok,S., Keizer,G., Linton,E., Llaca,V., Song,R., Tanyolac,B.,
Young,S., Ho-Il,K., Hahn,J.H., Sangsakoo,G., Vanavichit,A., de
Mattos,Luiz.A.T., Zimmer,P.D., Malone,G., Dellagostin,O., de
Oliveira,A.C., Bevan,M., Bancroft,I., Minx,P., Cordum,H.,
Wilson,R., Cheng,Z., Jin,W., Jiang,J., Leong,S.A., Iwama,H.,
Gojobori,T., Itoh,T., Niimura,Y., Fujii,Y., Habara,T., Sakai,H.,
Sato,Y., Wilson,G., Kumar,K., McCouch,S., Juretic,N., Hoen,D.,
Wright,S., Bruskiewich,R., Bureau,T., Miyao,A., Hirochika,H.,
Nishikawa,T., Kadowaki,K., Sugiura,M., Burr,B. and Sasaki,T.
CONSRTM International Rice Genome Sequencing Project
TITLE The map-based sequence of the rice genome
JOURNAL Nature 436 (7052), 793-800 (2005)
PUBMED 16100779
REFERENCE 3
CONSRTM IRGSP(International Rice Genome Sequencing Project)
TITLE Oryza sativa nipponbare(GA3) genomic DNA, chromosome 12
JOURNAL Unpublished
REFERENCE 4
CONSRTM The Rice Annotation Project (RAP)
TITLE Curated Genome Annotation of Oryza sativa ssp. japonica and
Comparative Genome Analysis with Arabidopsis thaliana
JOURNAL Unpublished
REFERENCE 5
CONSRTM The Rice Annotation Project (RAP)
TITLE The First Rice Annotation Project Meeting (RAP1)
JOURNAL Unpublished
REFERENCE 6 (residues 1 to 309)
AUTHORS Sasaki,T.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2004) Takuji Sasaki, National Institute of
Agrobiological Sciences, Rice Genome Research Program; Kannondai
2-1-2, Tsukuba, Ibaraki 305-8602, Japan
(E-mail:tsasaki@nias.affrc.go.jp, URL:http://rgp.dna.affrc.go.jp/,
Tel:81-298-38-7441, Fax:81-298-38-7468)
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BAF29324.
FEATURES Location/Qualifiers
source 1..309
/organism="Oryza sativa Japonica Group"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/chromosome="12"
Protein 1..309
/product="hypothetical protein"
/name="Os12g0178100"
/calculated_mol_wt=33371
Region 50..301
/region_name="ascorbate_peroxidase"
/note="Ascorbate peroxidases. This is a subgroup of
heme-dependent peroxidases of the plant superfamily that
share a heme prosthetic group and catalyze a multistep
oxidative reaction involving hydrogen peroxide as the
electron acceptor. Along with related...; cd00691"
/db_xref="CDD:29386"
Site order(61,68,166,194,198,200..204,208,286)
/site_type="other"
/note="heme binding site"
/db_xref="CDD:29386"
Site order(142,198,200..201,203,244,253..254)
/site_type="other"
/note="substrate binding site"
/db_xref="CDD:29386"
Site order(199,231,238)
/site_type="other"
/note="potassium binding site"
/db_xref="CDD:29386"
CDS 1..309
/gene="Os12g0178100"
/coded_by="NM_001072837.1:72..1001"
/note="Thylakoid-bound ascorbate peroxidase (EC 1.11.1.11)
(Fragment);
contains InterPro domain(s): IPR002016, IPR002207,
IPR010255;
has GO asignment(s): GO:0004601, GO:0006979;
similar to P92970;
supported by AK061107"
/db_xref="GeneID:4351663"
ORIGIN
1 mavvhrllrr glsaasplps lqelgrrpas ssaaaagdaa aelrgaredv kqllkstsch
61 pilvrlgwhd agtydknite wpkcggangs lrfeielkha anaglvnalk liqpikdkha
121 gvtyadlfql asataieeag gpkipmiygr vdvaapeqcp pegrlpaagp pspaehlrev
181 fyrmglsdke ivalsgahtl grsrpersgw gkpetkytkn gpgapggqsw tsqwlkfdns
241 yfkdikerrd edllvlptda vlfedssfki yaekyaadqd affedyaeah aklsnlgakf
301 dppkgisle
//