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Items: 1 to 20 of 79

1.
Multiple nuclear-replicating viruses require the stress-induced protein ZC3H11A for efficient growth
Shady Younis, Wael Kamel, Tina Falkeborn, Hao Wang, Di Yu, Robert Daniels, Magnus Essand, Jorma Hinkula, Göran Akusjärvi, Leif Andersson
Proc Natl Acad Sci U S A. 2018 Apr 17; 115(16): E3808–E3816. Published online 2018 Apr 2. doi: 10.1073/pnas.1722333115
PMCID:
PMC5910864
AbstractArticlePDF–1.3M
2.
The RNA-binding protein ZC3H11A interacts with the nuclear poly(A)-binding protein PABPN1 and alters polyadenylation of viral transcripts
Katharina Kases, Erik Schubert, Zamaneh Hajikhezri, Mårten Larsson, Priya Devi, Mahmoud Darweesh, Leif Andersson, Göran Akusjärvi, Tanel Punga, Shady Younis
J Biol Chem. 2023 Aug; 299(8): 104959. Published online 2023 Jun 23. doi: 10.1016/j.jbc.2023.104959
PMCID:
PMC10371797
AbstractArticlePDF–3.6M
3.
Genome-wide association analysis in East Asians identifies breast cancer susceptibility loci at 1q32.1, 5q14.3 and 15q26.1
Qiuyin Cai, Ben Zhang, Hyuna Sung, Siew-Kee Low, Sun-Seog Kweon, Wei Lu, Jiajun Shi, Jirong Long, Wanqing Wen, Ji-Yeob Choi, Dong-Young Noh, Chen-Yang Shen, Keitaro Matsuo, Soo-Hwang Teo, Mi Kyung Kim, Ui Soon Khoo, Motoki Iwasaki, Mikael Hartman, Atsushi Takahashi, Kyota Ashikawa, Koichi Matsuda, Min-Ho Shin, Min Ho Park, Ying Zheng, Yong-Bing Xiang, Bu-Tian Ji, Sue K. Park, Pei-Ei Wu, Chia-Ni Hsiung, Hidemi Ito, Yoshio Kasuga, Peter Kang, Shivaani Mariapun, Sei Hyun Ahn, Han Sung Kang, Kelvin Y. K. Chan, Ellen P. S. Man, Hiroji Iwata, Shoichiro Tsugane, Hui Miao, Jiemin Liao, Yusuke Nakamura, Michiaki Kubo, The DRIVE GAME-ON Consortium, Ryan J. Delahanty, Yanfeng Zhang, Bingshan Li, Chun Li, Yu-Tang Gao, Xiao-Ou Shu, Daehee Kang, Wei Zheng
Nat Genet. Author manuscript; available in PMC 2015 Feb 1.
Published in final edited form as: Nat Genet. 2014 Aug; 46(8): 886–890. Published online 2014 Jul 20. doi: 10.1038/ng.3041
PMCID:
PMC4127632
AbstractArticlePDF–406K
4.
The Proteins PDIP3 and ZC11A Associate with the Human TREX Complex in an ATP-Dependent Manner and Function in mRNA Export
Eric G. Folco, Chung-Sheng Lee, Kobina Dufu, Tomohiro Yamazaki, Robin Reed
PLoS One. 2012; 7(8): e43804. Published online 2012 Aug 23. doi: 10.1371/journal.pone.0043804
PMCID:
PMC3426524
AbstractArticlePDF–1.6M
5.
Proliferating cell nuclear antigen (PCNA)-associated KIAA0101/PAF15 protein is a cell cycle-regulated anaphase-promoting complex/cyclosome substrate
Michael J. Emanuele, Alberto Ciccia, Andrew E. H. Elia, Stephen J. Elledge
Proc Natl Acad Sci U S A. 2011 Jun 14; 108(24): 9845–9850. Published online 2011 May 31. doi: 10.1073/pnas.1106136108
PMCID:
PMC3116415
AbstractArticlePDF–764K
6.
K63 ubiquitylation triggers proteasomal degradation by seeding branched ubiquitin chains
Fumiaki Ohtake, Hikaru Tsuchiya, Yasushi Saeki, Keiji Tanaka
Proc Natl Acad Sci U S A. 2018 Feb 13; 115(7): E1401–E1408. Published online 2018 Jan 29. doi: 10.1073/pnas.1716673115
PMCID:
PMC5816176
AbstractArticlePDF–1.1M
7.
Follow-up of a major linkage peak on chromosome 1 reveals suggestive QTLs associated with essential hypertension: GenNet study
Georg B Ehret, Ashley A O'Connor, Alan Weder, Richard S Cooper, Aravinda Chakravarti
Eur J Hum Genet. 2009 Dec; 17(12): 1650–1657. Published online 2009 Jun 17. doi: 10.1038/ejhg.2009.94
PMCID:
PMC2783544
AbstractArticlePDF–494K
8.
Identification of FUBP1 as a Long Tail Cancer Driver and Widespread Regulator of Tumor Suppressor and Oncogene Alternative Splicing
Jessica S. Elman, Thomas K. Ni, Kristen E. Mengwasser, Dexter Jin, Ania Wronski, Stephen J. Elledge, Charlotte Kuperwasser
Cell Rep. Author manuscript; available in PMC 2020 Jun 16.
Published in final edited form as: Cell Rep. 2019 Sep 24; 28(13): 3435–3449.e5. doi: 10.1016/j.celrep.2019.08.060
PMCID:
PMC7297508
AbstractArticlePDF–2.4M
9.
KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4
Ashish Kumar, Yuanzhi Lyu, Yuichi Yanagihashi, Chanikarn Chantarasrivong, Vladimir Majerciak, Michelle Salemi, Kang-Hsin Wang, Tomoki Inagaki, Frank Chuang, Ryan R. Davis, Clifford G. Tepper, Kazushi Nakano, Chie Izumiya, Michiko Shimoda, Ken-ichi Nakajima, Alexander Merleev, Zhi-Ming Zheng, Mel Campbell, Yoshihiro Izumiya
Cell Rep. Author manuscript; available in PMC 2022 May 31.
Published in final edited form as: Cell Rep. 2022 May 10; 39(6): 110788. doi: 10.1016/j.celrep.2022.110788
PMCID:
PMC9153692
AbstractArticlePDF–3.0M
10.
HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137
Fengwen Zhang, Paul D Bieniasz
eLife. 2020; 9: e55806. Published online 2020 Jun 15. doi: 10.7554/eLife.55806
PMCID:
PMC7295576
AbstractArticlePDF–4.3M
11.
Systematic screening reveals a role for BRCA1 in the response to transcription-associated DNA damage
Sarah J. Hill, Thomas Rolland, Guillaume Adelmant, Xianfang Xia, Matthew S. Owen, Amélie Dricot, Travis I. Zack, Nidhi Sahni, Yves Jacob, Tong Hao, Kristine M. McKinney, Allison P. Clark, Deepak Reyon, Shengdar Q. Tsai, J. Keith Joung, Rameen Beroukhim, Jarrod A. Marto, Marc Vidal, Suzanne Gaudet, David E. Hill, David M. Livingston
Genes Dev. 2014 Sep 1; 28(17): 1957–1975. doi: 10.1101/gad.241620.114
PMCID:
PMC4197947
AbstractArticlePDF–2.4M
12.
A protein-RNA interaction atlas of the ribosome biogenesis factor AATF
Rainer W. J. Kaiser, Michael Ignarski, Eric L. Van Nostrand, Christian K. Frese, Manaswita Jain, Sadrija Cukoski, Heide Heinen, Melanie Schaechter, Lisa Seufert, Konstantin Bunte, Peter Frommolt, Patrick Keller, Mark Helm, Katrin Bohl, Martin Höhne, Bernhard Schermer, Thomas Benzing, Katja Höpker, Christoph Dieterich, Gene W. Yeo, Roman-Ulrich Müller, Francesca Fabretti
Sci Rep. 2019; 9: 11071. Published online 2019 Jul 30. doi: 10.1038/s41598-019-47552-3
PMCID:
PMC6667500
AbstractArticlePDF–2.8M
13.
Systematic interactome mapping of acute lymphoblastic leukemia cancer gene products reveals EXT-1 tumor suppressor as a Notch1 and FBWX7 common interactor
Sarah Daakour, Leon Juvenal Hajingabo, Despoina Kerselidou, Aurelie Devresse, Richard Kettmann, Nicolas Simonis, Franck Dequiedt, Jean-Claude Twizere
BMC Cancer. 2016; 16: 335. Published online 2016 May 26. doi: 10.1186/s12885-016-2374-2
PMCID:
PMC4882867
AbstractArticlePDF–1.8M
14.
RECQ1 helicase is involved in replication stress survival and drug resistance in multiple myeloma
E Viziteu, B Klein, J Basbous, Y-L Lin, C Hirtz, C Gourzones, L Tiers, A Bruyer, L Vincent, C Grandmougin, A Seckinger, H Goldschmidt, A Constantinou, P Pasero, D Hose, J Moreaux
Leukemia. 2017 Oct; 31(10): 2104–2113. Prepublished online 2017 Feb 10. Published online 2017 Mar 10. doi: 10.1038/leu.2017.54
PMCID:
PMC5629372
AbstractArticlePDF–2.9M
15.
Exploiting TRIM37-driven centrosome dysfunction to kill breast cancer cells
Zhong Y. Yeow, Bramwell G. Lambrus, Rebecca Marlow, Kevin H. Zhan, Mary-Anne Durin, Lauren T. Evans, Phillip M. Scott, Thao Phan, Elizabeth Park, Lorena A. Ruiz, Daniela Moralli, Eleanor G. Knight, Luned M. Badder, Daniela Novo, Syed Haider, Catherine M. Green, Andrew NJ Tutt, Christopher J Lord, J. Ross Chapman, Andrew J. Holland
Nature. Author manuscript; available in PMC 2021 Sep 9.
Published in final edited form as: Nature. 2020 Sep; 585(7825): 447–452. Published online 2020 Sep 9. doi: 10.1038/s41586-020-2690-1
PMCID:
PMC7597367
AbstractArticlePDF–1.7M
16.
Phosphoproteome analysis of the human mitotic spindle
Marjaana Nousiainen, Herman H. W. Silljé, Guido Sauer, Erich A. Nigg, Roman Körner
Proc Natl Acad Sci U S A. 2006 Apr 4; 103(14): 5391–5396. Published online 2006 Mar 24. doi: 10.1073/pnas.0507066103
PMCID:
PMC1459365
AbstractArticlePDF–370K
17.
Proximity labeling of endogenous RICTOR identifies mTOR complex 2 regulation by ADP ribosylation factor ARF1
Amelia K. Luciano, Ekaterina D. Korobkina, Scott P. Lyons, John A. Haley, Shelagh M. Fluharty, Su Myung Jung, Arminja N. Kettenbach, David A. Guertin
J Biol Chem. 2022 Oct; 298(10): 102379. Published online 2022 Aug 13. doi: 10.1016/j.jbc.2022.102379
PMCID:
PMC9513271
AbstractArticlePDF–2.7M
18.
Global analysis of TDP-43 interacting proteins reveals strong association with RNA splicing and translation machinery
Brian D. Freibaum, Raghu Chitta, Anthony A. High, J. Paul Taylor
J Proteome Res. Author manuscript; available in PMC 2011 Feb 5.
Published in final edited form as: J Proteome Res. 2010 Feb 5; 9(2): 1104–1120. doi: 10.1021/pr901076y
PMCID:
PMC2897173
AbstractArticlePDF–2.1M
19.
Ovarian tumorB1-mediated heat shock transcription factor 1 deubiquitination is critical for glycolysis and development of endometriosis
Xi Ling, Jiayi Lu, Xiaoyun Wang, Lan Liu, Lu Liu, Yadi Wang, Yujun Sun, Chune Ren, Chao Lu, Zhenhai Yu
iScience. 2022 Nov 18; 25(11): 105363. Published online 2022 Oct 14. doi: 10.1016/j.isci.2022.105363
PMCID:
PMC9626688
AbstractArticlePDF–6.0M
20.
An empirical framework for binary interactome mapping
Kavitha Venkatesan, Jean-François Rual, Alexei Vazquez, Ulrich Stelzl, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Martina Zenkner, Xiaofeng Xin, Kwang-II Goh, Muhammed A Yildirim, Nicolas Simonis, Kathrin Heinzmann, Fana Gebreab, Julie M Sahalie, Sebiha Cevik, Christophe Simon, Anne-Sophie de Smet, Elizabeth Dann, Alex Smolyar, Arunachalam Vinayagam, Haiyuan Yu, David Szeto, Heather Borick, Amélie Dricot, Niels Klitgord, Ryan R Murray, Chenwei Lin, Maciej Lalowski, Jan Timm, Kirstin Rau, Charles Boone, Pascal Braun, Michael E Cusick, Frederick P Roth, David E Hill, Jan Tavernier, Erich E Wanker, Albert-László Barabási, Marc Vidal
Nat Methods. Author manuscript; available in PMC 2010 May 18.
Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 83–90. Published online 2008 Dec 7. doi: 10.1038/nmeth.1280
PMCID:
PMC2872561
AbstractArticlePDF–1.0M

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