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Select item 101195321.

TUT4/7-mediated uridylation of a coronavirus subgenomic RNAs delays viral replication

Ankit Gupta, Yin Li, Shih-Heng Chen, Brian N. Papas, Negin P. Martin, Marcos Morgan

Commun Biol. 2023; 6: 438. Published online 2023 Apr 21. doi: 10.1038/s42003-023-04814-1

PMCID:: PMC10119532

Article PDF–1.8M

Select item 35100312.

Zcchc11 Uridylates Mature miRNAs to Enhance Neonatal IGF-1 Expression, Growth, and Survival

Matthew R. Jones, Matthew T. Blahna, Elyse Kozlowski, Kori Y. Matsuura, Joseph D. Ferrari, Samantha A. Morris, John T. Powers, George Q. Daley, Lee J. Quinton, Joseph P. Mizgerd

PLoS Genet. 2012 Nov; 8(11): e1003105. Published online 2012 Nov 29. doi: 10.1371/journal.pgen.1003105

PMCID:: PMC3510031

Article PDF–1.2M

Select item 54933063.

The RNA uridyltransferase Zcchc6 is expressed in macrophages and impacts innate immune responses

Elyse Kozlowski, Gregory A. Wasserman, Marcos Morgan, Dónal O’Carroll, Nora-Guadalupe P. Ramirez, Suryaram Gummuluru, Jasmine Y. Rah, Adam C. Gower, Michael Ieong, Lee J. Quinton, Joseph P. Mizgerd, Matthew R. Jones

PLoS One. 2017; 12(6): e0179797. Published online 2017 Jun 30. doi: 10.1371/journal.pone.0179797

PMCID:: PMC5493306

Article PDF–11M

Select item 27589234.

Lin28 recruits the TUTase Zcchc11 to inhibit let-7 maturation in embryonic stem cells

John P. Hagan, Elena Piskounova, Richard I. Gregory

Nat Struct Mol Biol. Author manuscript; available in PMC 2010 Apr 1.

Published in final edited form as: Nat Struct Mol Biol. 2009 Oct; 16(10): 1021–1025. Published online 2009 Aug 27. doi: 10.1038/nsmb.1676

PMCID:: PMC2758923

Article PDF–646K

Select item 64201295.

A programmed wave of uridylation-primed mRNA degradation is essential for meiotic progression and mammalian spermatogenesis

Marcos Morgan, Yuka Kabayama, Christian Much, Ivayla Ivanova, Monica Di Giacomo, Tatsiana Auchynnikava, Jack Michael Monahan, Dimitrios Michael Vitsios, Lina Vasiliauskaitė, Stefano Comazzetto, Juri Rappsilber, Robin Campbell Allshire, Bo Torben Porse, Anton James Enright, Dónal O’Carroll

Cell Res. 2019 Mar; 29(3): 221–232. Published online 2019 Jan 7. doi: 10.1038/s41422-018-0128-1

PMCID:: PMC6420129

Article PDF–2.9M

Select item 57682366.

mRNA 3' uridylation and poly(A) tail length sculpt the mammalian maternal transcriptome

Marcos Morgan, Christian Much, Monica DiGiacomo, Chiara Azzi, Ivayla Ivanova, Dimitrios M. Vitsios, Jelena Pistolic, Paul Collier, Pedro Moreira, Vladimir Benes, Anton J. Enright, Dónal O’Carroll

Nature. Author manuscript; available in PMC 2018 Feb 9.

Published in final edited form as: Nature. 2017 Aug 17; 548(7667): 347–351. Published online 2017 Aug 9. doi: 10.1038/nature23318

PMCID:: PMC5768236

Article PDF–5.8M

Select item 27593067.

Zcchc11-dependent uridylation of microRNA directs cytokine expression

Matthew R. Jones, Lee J. Quinton, Matthew T. Blahna, Joel R. Neilson, Suneng Fu, Alexander R. Ivanov, Dieter A. Wolf, Joseph P. Mizgerd

Nat Cell Biol. Author manuscript; available in PMC 2010 Mar 1.

Published in final edited form as: Nat Cell Biol. 2009 Sep; 11(9): 1157–1163. Published online 2009 Aug 23. doi: 10.1038/ncb1931

PMCID:: PMC2759306

Article PDF–1.0M

Select item 55428668.

Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis

Christopher R. Faehnle, Jack Walleshauser, Leemor Joshua-Tor

Nat Struct Mol Biol. Author manuscript; available in PMC 2018 Jan 3.

Published in final edited form as: Nat Struct Mol Biol. 2017 Aug; 24(8): 658–665. Published online 2017 Jul 3. doi: 10.1038/nsmb.3428

PMCID:: PMC5542866

Article PDF–1.0M

Select item 69544489.

Characterization of zygotic genome activation-dependent maternal mRNA clearance in mouse

Qian-Qian Sha, Ye-Zhang Zhu, Sen Li, Yu Jiang, Lu Chen, Xiao-Hong Sun, Li Shen, Xiang-Hong Ou, Heng-Yu Fan

Nucleic Acids Res. 2020 Jan 24; 48(2): 879–894. Published online 2019 Nov 28. doi: 10.1093/nar/gkz1111

PMCID:: PMC6954448

Article PDF–5.5M

Select item 450407810.

Transgenically-expressed secretoglobin 3A2 accelerates resolution of bleomycin-induced pulmonary fibrosis in mice

Yan Cai, Mitsuhiro Yoneda, Takeshi Tomita, Reiko Kurotani, Minoru Okamoto, Taketomo Kido, Hiroyuki Abe, Wayne Mitzner, Arjun Guha, Shioko Kimura

BMC Pulm Med. 2015; 15: 72. Published online 2015 Jul 16. doi: 10.1186/s12890-015-0065-4

PMCID:: PMC4504078

Article PDF–2.0M

Select item 325246511.

Oct4 links multiple epigenetic pathways to the pluripotency network

Junjun Ding, Huilei Xu, Francesco Faiola, Avi Ma'ayan, Jianlong Wang

Cell Res. 2012 Jan; 22(1): 155–167. Published online 2011 Nov 15. doi: 10.1038/cr.2011.179

PMCID:: PMC3252465

Article PDF–2.7M

Select item 660230012.

New roles for the de-ubiquitylating enzyme OTUD4 in an RNA–protein network and RNA granules

Richa Das, Lukas Schwintzer, Stanislav Vinopal, Eva Aguado Roca, Marc Sylvester, Ana-Maria Oprisoreanu, Susanne Schoch, Frank Bradke, Meike Broemer

J Cell Sci. 2019 Jun 15; 132(12): jcs229252. Published online 2019 Jun 17. doi: 10.1242/jcs.229252

PMCID:: PMC6602300

Article

Select item 2980013.

Database resources of the National Center for Biotechnology Information

David L. Wheeler, Deanna M. Church, Alex E. Lash, Detlef D. Leipe, Thomas L. Madden, Joan U. Pontius, Gregory D. Schuler, Lynn M. Schriml, Tatiana A. Tatusova, Lukas Wagner, Barbara A. Rapp

Nucleic Acids Res. 2001 Jan 1; 29(1): 11–16. doi: 10.1093/nar/29.1.11

PMCID:: PMC29800

Article PDF–101K

Select item 741599114.

BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)

Kou Motani, Hidetaka Kosako

J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323

PMCID:: PMC7415991

Article PDF–2.0M

Select item 396496415.

The Vertebrate Genome Annotation browser 10 years on

Jennifer L. Harrow, Charles A. Steward, Adam Frankish, James G. Gilbert, Jose M. Gonzalez, Jane E. Loveland, Jonathan Mudge, Dan Sheppard, Mark Thomas, Stephen Trevanion, Laurens G. Wilming

Nucleic Acids Res. 2014 Jan 1; 42(Database issue): D771–D779. Published online 2013 Dec 6. doi: 10.1093/nar/gkt1241

PMCID:: PMC3964964

Article PDF–11M

Select item 18788516.

A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome

Jens Hansen, Thomas Floss, Petra Van Sloun, Ernst-Martin Füchtbauer, Franz Vauti, Hans-Hennig Arnold, Frank Schnütgen, Wolfgang Wurst, Harald von Melchner, Patricia Ruiz

Proc Natl Acad Sci U S A. 2003 Aug 19; 100(17): 9918–9922. Published online 2003 Aug 6. doi: 10.1073/pnas.1633296100

PMCID:: PMC187885

Article PDF–287K

Select item 16551117.

BayGenomics: a resource of insertional mutations in mouse embryonic stem cells

Doug Stryke, Michiko Kawamoto, Conrad C. Huang, Susan J. Johns, Leslie A. King, Courtney A. Harper, Elaine C. Meng, Roy E. Lee, Alice Yee, Larry L'Italien, Pao-Tien Chuang, Stephen G. Young, William C. Skarnes, Patricia C. Babbitt, Thomas E. Ferrin

Nucleic Acids Res. 2003 Jan 1; 31(1): 278–281. doi: 10.1093/nar/gkg064

PMCID:: PMC165511

Article PDF–217K

Select item 793877018.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Article PDF–2.0M

Select item 255627019.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Article PDF–493K

Select item 1091766020.

Genetic determinants of micronucleus formation in vivo

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Article PDF–4.8M

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