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Items: 1 to 20 of 23

1.
A Portrait of Ribosomal DNA Contacts with Hi-C Reveals 5S and 45S rDNA Anchoring Points in the Folded Human Genome
Shoukai Yu, Bernardo Lemos
Genome Biol Evol. 2016 Nov; 8(11): 3545–3558. Published online 2016 Nov 9. doi: 10.1093/gbe/evw257
PMCID:
PMC5203791
ArticlePDF–1.2M
2.
The nucleolus: a raft adrift in the nuclear sea or the keystone in nuclear structure?
Justin M. O’Sullivan, Dave A. Pai, Andrew G. Cridge, David R. Engelke, Austen R. D. Ganley
Biomol Concepts. Author manuscript; available in PMC 2016 Nov 8.
Published in final edited form as: Biomol Concepts. 2013 Jun; 4(3): 277–286. doi: 10.1515/bmc-2012-0043
PMCID:
PMC5100006
ArticlePDF–498K
3.
The Epigenetic Pathways to Ribosomal DNA Silencing
Rakesh Srivastava, Rashmi Srivastava, Seong Hoon Ahn
Microbiol Mol Biol Rev. 2016 Sep; 80(3): 545–563. Published online 2016 Jun 1. doi: 10.1128/MMBR.00005-16
PMCID:
PMC4981667
ArticlePDF–1.9M
4.
Nucleolar organizer regions: genomic ‘dark matter’ requiring illumination
Brian McStay
Genes Dev. 2016 Jul 15; 30(14): 1598–1610. doi: 10.1101/gad.283838.116
PMCID:
PMC4973289
ArticlePDF–425K
5.
Concerted copy number variation balances ribosomal DNA dosage in human and mouse genomes
John G. Gibbons, Alan T. Branco, Susana A. Godinho, Shoukai Yu, Bernardo Lemos
Proc Natl Acad Sci U S A. 2015 Feb 24; 112(8): 2485–2490. Published online 2015 Jan 12. doi: 10.1073/pnas.1416878112
PMCID:
PMC4345604
ArticlePDF–1.1M
6.
Duration of the first steps of the human rRNA processing
Alexey Popov, Evgeny Smirnov, Lubomír Kováčik, Otakar Raška, Guy Hagen, Lenka Stixová, Ivan Raška
Nucleus. 2013 Mar 1; 4(2): 134–141. doi: 10.4161/nucl.23985
PMCID:
PMC3621745
ArticlePDF–2.5M
7.
Overexpression of ribosomal RNA in prostate cancer is common but not linked to rDNA promoter hypomethylation
M Uemura, Q Zheng, C M Koh, W G Nelson, S Yegnasubramanian, A M De Marzo
Oncogene. 2012 Mar 8; 31(10): 1254–1263. Published online 2011 Aug 8. doi: 10.1038/onc.2011.319
PMCID:
PMC3298623
ArticlePDF–946K
8.
Genomic architecture and inheritance of human ribosomal RNA gene clusters
Dawn M. Stults, Michael W. Killen, Heather H. Pierce, Andrew J. Pierce
Genome Res. 2008 Jan; 18(1): 13–18. doi: 10.1101/gr.6858507
PMCID:
PMC2134781
ArticlePDF–449K
9.
The human 18S ribosomal RNA gene: evolution and stability.
I L Gonzalez, R D Schmickel
Am J Hum Genet. 1986 Apr; 38(4): 419–427.
PMCID:
PMC1684796
SummaryPage BrowsePDF–898K
10.
Human ribosomal RNA gene arrays display a broad range of palindromic structures
Sandrine Caburet, Chiara Conti, Catherine Schurra, Ronald Lebofsky, Stuart J. Edelstein, Aaron Bensimon
Genome Res. 2005 Aug; 15(8): 1079–1085. doi: 10.1101/gr.3970105
PMCID:
PMC1182220
ArticlePDF–419K
11.
Human 18 S ribosomal RNA sequence inferred from DNA sequence. Variations in 18 S sequences and secondary modification patterns between vertebrates.
F S McCallum, B E Maden
Biochem J. 1985 Dec 15; 232(3): 725–733. doi: 10.1042/bj2320725
PMCID:
PMC1152944
SummaryPage BrowsePDF–1.5M
12.
Clones of human ribosomal DNA containing the complete 18 S-rRNA and 28 S-rRNA genes. Characterization, a detailed map of the human ribosomal transcription unit and diversity among clones.
B E Maden, C L Dent, T E Farrell, J Garde, F S McCallum, J A Wakeman
Biochem J. 1987 Sep 1; 246(2): 519–527. doi: 10.1042/bj2460519
PMCID:
PMC1148304
SummaryPage BrowsePDF–1.8M
13.
Variation among human 28S ribosomal RNA genes.
I L Gonzalez, J L Gorski, T J Campen, D J Dorney, J M Erickson, J E Sylvester, R D Schmickel
Proc Natl Acad Sci U S A. 1985 Nov; 82(22): 7666–7670. doi: 10.1073/pnas.82.22.7666
PMCID:
PMC391394
SummaryPage BrowsePDF–1.0M
14.
Location of Ribosomal DNA in the Human Chromosome Complement
A. S. Henderson, D. Warburton, K. C. Atwood
Proc Natl Acad Sci U S A. 1972 Nov; 69(11): 3394–3398. doi: 10.1073/pnas.69.11.3394
PMCID:
PMC389778
SummaryPage BrowsePDF–1.7M
15.
Primary processing of mammalian rRNA involves two adjacent cleavages and is not species specific.
S Kass, N Craig, B Sollner-Webb
Mol Cell Biol. 1987 Aug; 7(8): 2891–2898. doi: 10.1128/mcb.7.8.2891
PMCID:
PMC367908
SummaryPage BrowsePDF–2.0M
16.
Two distinct promoter elements in the human rRNA gene identified by linker scanning mutagenesis.
M M Haltiner, S T Smale, R Tjian
Mol Cell Biol. 1986 Jan; 6(1): 227–235. doi: 10.1128/mcb.6.1.227
PMCID:
PMC367502
SummaryPage BrowsePDF–2.5M
17.
Evolutionary changes of sequences and factors that direct transcription termination of human and mouse ribsomal genes.
I Bartsch, C Schoneberg, I Grummt
Mol Cell Biol. 1987 Jul; 7(7): 2521–2529. doi: 10.1128/mcb.7.7.2521
PMCID:
PMC365386
SummaryPage BrowsePDF–2.0M
18.
Human ribosomal RNA gene: nucleotide sequence of the transcription initiation region and comparison of three mammalian genes.
I Financsek, K Mizumoto, Y Mishima, M Muramatsu
Proc Natl Acad Sci U S A. 1982 May; 79(10): 3092–3096. doi: 10.1073/pnas.79.10.3092
PMCID:
PMC346359
SummaryPage BrowsePDF–1.2M
19.
A novel strategy for constructing clustered point mutations.
M Haltiner, T Kempe, R Tjian
Nucleic Acids Res. 1985 Feb 11; 13(3): 1015–1025. doi: 10.1093/nar/13.3.1015
PMCID:
PMC341049
SummaryPage BrowsePDF–810K
20.
Identification of the in vivo and in vitro origin of transcription in human rDNA.
R Miesfeld, N Arnheim
Nucleic Acids Res. 1982 Jul 10; 10(13): 3933–3949. doi: 10.1093/nar/10.13.3933
PMCID:
PMC320769
SummaryPage BrowsePDF–1.7M

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