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Kanamycin response

MedGen UID:
776650
Concept ID:
CN184547
Sign or Symptom
Drug:
Kanamycin
MedGen UID:
7193
Concept ID:
C0022487
Antibiotic
An aminoglycoside antibiotic with antimicrobial property. Amikacin irreversibly binds to the bacterial 30S ribosomal subunit, specifically in contact with 16S rRNA and S12 protein within the 30S subunit. This leads to interference with translational initiation complex and, misreading of mRNA, thereby hampering protein synthesis and resulting in bactericidal effect. This agent is usually used for treatment of E. coli, Proteus species (both indole-positive and indole-negative), E. aerogenes, K. pneumoniae, S. marcescens, and Acinetobacter species. [from NCI]
 
Genes (locations): MT-RNR1; MT-TS1; RNR1 (13p12); TRMU (22q13.31)

Definition

Aminoglycosides are widely used antibiotics which inhibit protein synthesis in bacteria by binding to bacterial 16S ribosomal subunits. Aminoglycosides are associated with a number of adverse events, including nephrotoxicity and ototoxicity. The risk of aminoglycoside-induced ototoxicity is increased in patients who carry certain variants in the MT-RNR1 gene. MT-RNR1 is found in the mitochondrial genome and encodes the 12S ribosomal subunit. Some MT-RNR1 variants cause the 12S subunit to more closely resemble the bacterial 16S subunit, which can lead to aminoglycoside molecules binding to the ribosome. This ultimately results in hearing loss due to cell death in the cochlea. The Clinical Pharmacogenetics Implementation Consortium (CPIC) have published recommendations on aminoglycoside use in patients carrying MT-RNR1 variants in the journal Clinical Pharmacology and Therapeutics. These recommendations are also available on the CPIC and PharmGKB websites. [from PharmGKB]

Additional description

From GeneReviews
Mitochondrial nonsyndromic hearing loss and deafness is characterized by sensorineural hearing loss (SNHL) of variable onset and severity. Pathogenic variants in MT-RNR1 can be associated with predisposition to aminoglycoside ototoxicity and/or late-onset SNHL. Hearing loss associated with aminoglycoside ototoxicity is bilateral and severe to profound, occurring within a few days to weeks after administration of any amount (even a single dose) of an aminoglycoside antibiotic such as gentamycin, tobramycin, amikacin, kanamycin, or streptomycin. Pathogenic variants in MT-TS1 are usually associated with childhood onset of SNHL that is generally nonsyndromic – although the MT-TS1 substitution m.7445A>G has been found in some families who also have palmoplantar keratoderma (scaling, hyperkeratosis, and honeycomb appearance of the skin of the palms, soles, and heels).

Term Hierarchy

Professional guidelines

PubMed

Griffith DE, Daley CL
Chest 2022 Jan;161(1):64-75. Epub 2021 Jul 24 doi: 10.1016/j.chest.2021.07.035. PMID: 34314673
Lan Z, Ahmad N, Baghaei P, Barkane L, Benedetti A, Brode SK, Brust JCM, Campbell JR, Chang VWL, Falzon D, Guglielmetti L, Isaakidis P, Kempker RR, Kipiani M, Kuksa L, Lange C, Laniado-Laborín R, Nahid P, Rodrigues D, Singla R, Udwadia ZF, Menzies D; Collaborative Group for the Meta-Analysis of Individual Patient Data in MDR-TB treatment 2017
Lancet Respir Med 2020 Apr;8(4):383-394. Epub 2020 Mar 17 doi: 10.1016/S2213-2600(20)30047-3. PMID: 32192585Free PMC Article
Benwill JL, Wallace RJ Jr
Curr Opin Infect Dis 2014 Dec;27(6):506-10. doi: 10.1097/QCO.0000000000000104. PMID: 25268925

Curated

DailyMed Drug Label, KANAMYCIN, 2012

Recent clinical studies

Etiology

Friberg LE
Clin Pharmacol Ther 2021 Apr;109(4):856-866. Epub 2021 Mar 8 doi: 10.1002/cpt.2182. PMID: 33523464
Lan Z, Ahmad N, Baghaei P, Barkane L, Benedetti A, Brode SK, Brust JCM, Campbell JR, Chang VWL, Falzon D, Guglielmetti L, Isaakidis P, Kempker RR, Kipiani M, Kuksa L, Lange C, Laniado-Laborín R, Nahid P, Rodrigues D, Singla R, Udwadia ZF, Menzies D; Collaborative Group for the Meta-Analysis of Individual Patient Data in MDR-TB treatment 2017
Lancet Respir Med 2020 Apr;8(4):383-394. Epub 2020 Mar 17 doi: 10.1016/S2213-2600(20)30047-3. PMID: 32192585Free PMC Article
Felix LM, Grundy S, Milan SJ, Armstrong R, Harrison H, Lynes D, Spencer S
Cochrane Database Syst Rev 2018 Jun 11;6(6):CD012514. doi: 10.1002/14651858.CD012514.pub2. PMID: 29889304Free PMC Article
Udoh A, Effa EE, Oduwole O, Okusanya BO, Okafo O
Cochrane Database Syst Rev 2016 Jul 1;7(7):CD011528. doi: 10.1002/14651858.CD011528.pub2. PMID: 27364644Free PMC Article
Rodieux F, Wilbaux M, van den Anker JN, Pfister M
Clin Pharmacokinet 2015 Dec;54(12):1183-204. doi: 10.1007/s40262-015-0298-7. PMID: 26138291Free PMC Article

Diagnosis

Amri F, Septiani NLW, Rezki M, Iqbal M, Yamauchi Y, Golberg D, Kaneti YV, Yuliarto B
J Mater Chem B 2021 Feb 15;9(5):1189-1207. doi: 10.1039/d0tb02292f. PMID: 33406200
Felix LM, Grundy S, Milan SJ, Armstrong R, Harrison H, Lynes D, Spencer S
Cochrane Database Syst Rev 2018 Jun 11;6(6):CD012514. doi: 10.1002/14651858.CD012514.pub2. PMID: 29889304Free PMC Article
Robati RY, Arab A, Ramezani M, Langroodi FA, Abnous K, Taghdisi SM
Biosens Bioelectron 2016 Aug 15;82:162-72. Epub 2016 Apr 5 doi: 10.1016/j.bios.2016.04.011. PMID: 27085947
Benwill JL, Wallace RJ Jr
Curr Opin Infect Dis 2014 Dec;27(6):506-10. doi: 10.1097/QCO.0000000000000104. PMID: 25268925
Ristuccia AM, Cunha BA
Ther Drug Monit 1985;7(1):12-25. doi: 10.1097/00007691-198503000-00003. PMID: 3887667

Therapy

Kato H, Hamada Y
Int J Environ Res Public Health 2022 Feb 10;19(4) doi: 10.3390/ijerph19041972. PMID: 35206156Free PMC Article
Griffith DE, Daley CL
Chest 2022 Jan;161(1):64-75. Epub 2021 Jul 24 doi: 10.1016/j.chest.2021.07.035. PMID: 34314673
Felix LM, Grundy S, Milan SJ, Armstrong R, Harrison H, Lynes D, Spencer S
Cochrane Database Syst Rev 2018 Jun 11;6(6):CD012514. doi: 10.1002/14651858.CD012514.pub2. PMID: 29889304Free PMC Article
Jenkins A, Thomson AH, Brown NM, Semple Y, Sluman C, MacGowan A, Lovering AM, Wiffen PJ; (BSAC Working Party on Therapeutic Drug Monitoring)
J Antimicrob Chemother 2016 Oct;71(10):2754-9. Epub 2016 Jul 11 doi: 10.1093/jac/dkw250. PMID: 27494904
Ristuccia AM, Cunha BA
Ther Drug Monit 1985;7(1):12-25. doi: 10.1097/00007691-198503000-00003. PMID: 3887667

Prognosis

Griffith DE, Daley CL
Chest 2022 Jan;161(1):64-75. Epub 2021 Jul 24 doi: 10.1016/j.chest.2021.07.035. PMID: 34314673
Lan Z, Ahmad N, Baghaei P, Barkane L, Benedetti A, Brode SK, Brust JCM, Campbell JR, Chang VWL, Falzon D, Guglielmetti L, Isaakidis P, Kempker RR, Kipiani M, Kuksa L, Lange C, Laniado-Laborín R, Nahid P, Rodrigues D, Singla R, Udwadia ZF, Menzies D; Collaborative Group for the Meta-Analysis of Individual Patient Data in MDR-TB treatment 2017
Lancet Respir Med 2020 Apr;8(4):383-394. Epub 2020 Mar 17 doi: 10.1016/S2213-2600(20)30047-3. PMID: 32192585Free PMC Article
Benwill JL, Wallace RJ Jr
Curr Opin Infect Dis 2014 Dec;27(6):506-10. doi: 10.1097/QCO.0000000000000104. PMID: 25268925
Venkatswami S, Sankarasubramanian A, Subramanyam S
Int J Low Extrem Wounds 2012 Mar;11(1):31-42. Epub 2012 Feb 14 doi: 10.1177/1534734612438549. PMID: 22334597
Ristuccia AM, Cunha BA
Ther Drug Monit 1985;7(1):12-25. doi: 10.1097/00007691-198503000-00003. PMID: 3887667

Clinical prediction guides

Van N, Degefu YN, Leus PA, Larkins-Ford J, Klickstein J, Maurer FP, Stone D, Poonawala H, Thorpe CM, Smith TC 2nd, Aldridge BB
Antimicrob Agents Chemother 2023 Jul 18;67(7):e0009023. Epub 2023 Jun 6 doi: 10.1128/aac.00090-23. PMID: 37278639Free PMC Article
Griffith DE, Daley CL
Chest 2022 Jan;161(1):64-75. Epub 2021 Jul 24 doi: 10.1016/j.chest.2021.07.035. PMID: 34314673
Friberg LE
Clin Pharmacol Ther 2021 Apr;109(4):856-866. Epub 2021 Mar 8 doi: 10.1002/cpt.2182. PMID: 33523464
Smits A, Kulo A, van den Anker J, Allegaert K
Expert Opin Drug Metab Toxicol 2017 Feb;13(2):157-166. Epub 2016 Sep 21 doi: 10.1080/17425255.2017.1234606. PMID: 27623706
Ristuccia AM, Cunha BA
Ther Drug Monit 1985;7(1):12-25. doi: 10.1097/00007691-198503000-00003. PMID: 3887667

Recent systematic reviews

Lan Z, Ahmad N, Baghaei P, Barkane L, Benedetti A, Brode SK, Brust JCM, Campbell JR, Chang VWL, Falzon D, Guglielmetti L, Isaakidis P, Kempker RR, Kipiani M, Kuksa L, Lange C, Laniado-Laborín R, Nahid P, Rodrigues D, Singla R, Udwadia ZF, Menzies D; Collaborative Group for the Meta-Analysis of Individual Patient Data in MDR-TB treatment 2017
Lancet Respir Med 2020 Apr;8(4):383-394. Epub 2020 Mar 17 doi: 10.1016/S2213-2600(20)30047-3. PMID: 32192585Free PMC Article
Felix LM, Grundy S, Milan SJ, Armstrong R, Harrison H, Lynes D, Spencer S
Cochrane Database Syst Rev 2018 Jun 11;6(6):CD012514. doi: 10.1002/14651858.CD012514.pub2. PMID: 29889304Free PMC Article
Jenkins A, Thomson AH, Brown NM, Semple Y, Sluman C, MacGowan A, Lovering AM, Wiffen PJ; (BSAC Working Party on Therapeutic Drug Monitoring)
J Antimicrob Chemother 2016 Oct;71(10):2754-9. Epub 2016 Jul 11 doi: 10.1093/jac/dkw250. PMID: 27494904
Udoh A, Effa EE, Oduwole O, Okusanya BO, Okafo O
Cochrane Database Syst Rev 2016 Jul 1;7(7):CD011528. doi: 10.1002/14651858.CD011528.pub2. PMID: 27364644Free PMC Article
Uttley L, Harnan S, Cantrell A, Taylor C, Walshaw M, Brownlee K, Tappenden P
Eur Respir Rev 2013 Dec;22(130):476-86. doi: 10.1183/09059180.00001513. PMID: 24293463Free PMC Article

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