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    FAM90A16 family with sequence similarity 90 member A16 [ Homo sapiens (human) ]

    Gene ID: 441323, updated on 8-Nov-2023

    Summary

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    Official Symbol
    FAM90A16provided by HGNC
    Official Full Name
    family with sequence similarity 90 member A16provided by HGNC
    Primary source
    HGNC:HGNC:32264
    See related
    Ensembl:ENSG00000285620 AllianceGenome:HGNC:32264
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FAM90A16P; FAM90A17P
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    Genomic context

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    See FAM90A16 in Genome Data Viewer
    Location:
    8p23.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (7730739..7733749)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (11876686..11879696)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (7588261..7591271)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene family with sequence similarity 90 member A14 Neighboring gene family with sequence similarity 90 member A18 Neighboring gene family with sequence similarity 90 member A8 Neighboring gene family with sequence similarity 90 member A17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds. Bosch N, et al. Gene, 2008 Sep 1. PMID 18602769
    2. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. Bosch N, et al. Hum Mol Genet, 2007 Nov 1. PMID 17684299

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General protein information

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    Preferred Names
    protein FAM90A16
    Names
    FAM90A pseudogene
    Protein FAM90A16
    family with sequence similarity 90 member A16, pseudogene
    putative protein FAM90A16P/FAM90A17P

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001397396.1 → NP_001384325.1  protein FAM90A16

      Status: INFERRED

      Source sequence(s)
      AC084121
      Consensus CDS
      CCDS94253.1
      UniProtKB/Swiss-Prot
      A6NEW6, P0DV73, P0DV74, Q658T7
      Related
      ENSP00000497037.1, ENST00000648174.1
      Conserved Domains (2) summary
      PHA03247
      Location:25 → 371
      PHA03247; large tegument protein UL36; Provisional
      pfam15288
      Location:41 → 76
      zf-CCHC_6; Zinc knuckle

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      7730739..7733749
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_018654717.1 Reference GRCh38.p14 PATCHES

      Range
      5335617..5338627
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      11876686..11879696
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_011769.1: Suppressed sequence

      Description
      NG_011769.1: This RefSeq was removed because it is now thought that this gene does encode a protein.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0DV73.1 GenPept UniProtKB/Swiss-Prot:P0DV73

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