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    LOC102356118 protein jagunal homolog 1 [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102356118, updated on 26-Apr-2024

    Summary

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    Gene symbol
    LOC102356118
    Gene description
    protein jagunal homolog 1
    See related
    Ensembl:ENSLACG00000015085
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Also known as
    JAGN1
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    Genomic context

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    See LOC102356118 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 4 NC_088142.1 (46899236..46914139)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819284.1 (1166671..1179430, complement)

    Chromosome 4 - NC_088142.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(VIII) chain Neighboring gene FMR1-interacting protein NUFIP1-like Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 6 Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC135356518 Neighboring gene uncharacterized LOC102355929

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in granulocyte colony-stimulating factor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein jagunal homolog 1
    Names
    jagunal homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088142.1 Reference fLatCha1.pri

      Range
      46899236..46914139
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005995750.3 → XP_005995812.1  protein jagunal homolog 1

      UniProtKB/TrEMBL
      H3B5E8
      Related
      ENSLACP00000017119.2
      Conserved Domains (1) summary
      pfam07086
      Location:1 → 174
      Jagunal; Jagunal, ER re-organization during oogenesis
    Nucleotide Protein
    Heading Accession and Version

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