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    HERPUD2 HERPUD family member 2 [ Chelonia mydas (Green sea turtle) ]

    Gene ID: 102941967, updated on 10-Mar-2024

    Summary

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    Gene symbol
    HERPUD2
    Gene description
    HERPUD family member 2
    Locus tag
    UY3_12724
    See related
    EnsemblRapid:ENSCMYG00015022087
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelonia mydas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
    Orthologs
    human mouse all
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    Genomic context

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    See HERPUD2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (174712977..174743200)
    102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (174714859..174743206)

    Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene septin 7 Neighboring gene uncharacterized LOC119565369 Neighboring gene uncharacterized LOC122464652 Neighboring gene uncharacterized LOC122464322

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum unfolded protein response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein
    Names
    Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rCheMyd1.pri.v2 Primary Assembly

    Genomic

    1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

      Range
      174712977..174743200
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007065884.4 → XP_007065946.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X1

      UniProtKB/TrEMBL
      M7AX98
      Related
      ENSCMYP00015033580.1, ENSCMYT00015041514.1
      Conserved Domains (2) summary
      cd01790
      Location:9 → 87
      Herp_N; Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain protein
      smart00213
      Location:10 → 87
      UBQ; Ubiquitin homologues

    2. XM_037890063.2 → XP_037745991.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X3

      UniProtKB/TrEMBL
      M7AX98
      Related
      ENSCMYP00015033572.1, ENSCMYT00015041498.1
      Conserved Domains (1) summary
      cd17119
      Location:9 → 79
      Ubl_HERP2; ubiquitin-like (Ubl) domain found in homocysteine-inducible endoplasmic reticulum stress protein HERP2 and similar proteins

    3. XM_037890062.2 → XP_037745990.1  homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein isoform X2

      UniProtKB/TrEMBL
      M7AX98
      Related
      ENSCMYP00015033575.1, ENSCMYT00015041504.1
      Conserved Domains (1) summary
      cl28922
      Location:9 → 59
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    Nucleotide Protein
    Heading Accession and Version

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