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    LOC9329533 protein EXECUTER 2, chloroplastic [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9329533, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9329533
    Gene description
    protein EXECUTER 2, chloroplastic
    Locus tag
    ARALYDRAFT_680502
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See LOC9329533 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302555.1 (12031885..12035567, complement)

    NW_003302555.1Genomic Context describing neighboring genes Neighboring gene lecithin-cholesterol acyltransferase-like 1 Neighboring gene putative F-box protein At3g23260 Neighboring gene protein KINESIN LIGHT CHAIN-RELATED 3 Neighboring gene alpha-mannosidase I MNS5 Neighboring gene ubiquitin-fold modifier-conjugating enzyme 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302555 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in response to singlet oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in singlet oxygen-mediated programmed cell death IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in thylakoid membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein EXECUTER 2, chloroplastic
    Names
    predicted protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302555.1 Reference v.1.0 Primary Assembly

      Range
      12031885..12035567 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002893426.2 → XP_002893472.1  protein EXECUTER 2, chloroplastic

      See identical proteins and their annotated locations for XP_002893472.1

      UniProtKB/TrEMBL
      D7KBR0
      Conserved Domains (2) summary
      pfam02151
      Location:100 → 131
      UVR; UvrB/uvrC motif
      pfam12014
      Location:484 → 612
      DUF3506; Domain of unknown function (DUF3506)
    Nucleotide Protein
    Heading Accession and Version

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