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    Exoc7 exocyst complex component 7 [ Mus musculus (house mouse) ]

    Gene ID: 53413, updated on 11-Apr-2024

    Summary

    Official Symbol
    Exoc7provided by MGI
    Official Full Name
    exocyst complex component 7provided by MGI
    Primary source
    MGI:MGI:1859270
    See related
    Ensembl:ENSMUSG00000020792 AllianceGenome:MGI:1859270
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Exo70; sec70
    Summary
    Involved in protein localization to ciliary membrane. Located in growth cone membrane. Is active in ciliary basal body. Is expressed in thymus primordium. Orthologous to human EXOC7 (exocyst complex component 7). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in whole brain E14.5 (RPKM 16.9), CNS E14 (RPKM 16.2) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    11 E2; 11 81.11 cM
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (116178823..116197574, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (116287997..116306750, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene signal recognition particle 68 Neighboring gene STARR-positive B cell enhancer ABC_E9847 Neighboring gene galanin receptor 2 Neighboring gene STARR-positive B cell enhancer ABC_E7099 Neighboring gene predicted gene, 26730 Neighboring gene STARR-seq mESC enhancer starr_31197 Neighboring gene STARR-seq mESC enhancer starr_31198 Neighboring gene forkhead box J1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein-macromolecule adaptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in centriolar satellite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    part_of exocyst IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of exocyst NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in growth cone membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in microtubule organizing center ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in midbody ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
     

    General protein information

    Preferred Names
    exocyst complex component 7
    Names
    exocyst complex component Exo70
    exocyst component protein 70 kDa homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001162872.3NP_001156344.1  exocyst complex component 7 isoform 2

      See identical proteins and their annotated locations for NP_001156344.1

      Status: VALIDATED

      Source sequence(s)
      AL645861
      Consensus CDS
      CCDS48983.1
      UniProtKB/TrEMBL
      Q3TIP4, Q542L0, Q7TPT3
      Related
      ENSMUSP00000102019.4, ENSMUST00000106411.10
      Conserved Domains (1) summary
      pfam03081
      Location:288647
      Exo70; Exo70 exocyst complex subunit
    2. NM_001347636.3NP_001334565.1  exocyst complex component 7 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AL645861
      Consensus CDS
      CCDS83935.1
      UniProtKB/TrEMBL
      A2AAN0, Q3TIP4, Q7TPT3
      Related
      ENSMUSP00000102021.4, ENSMUST00000106413.10
    3. NM_001362838.2NP_001349767.1  exocyst complex component 7 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AL645861
      UniProtKB/TrEMBL
      Q69ZS4
      Conserved Domains (1) summary
      pfam03081
      Location:342714
      Exo70; Exo70 exocyst complex subunit
    4. NM_001362839.2NP_001349768.1  exocyst complex component 7 isoform 5

      Status: VALIDATED

      Source sequence(s)
      AL645861
      UniProtKB/TrEMBL
      Q3TIP4, Q7TPT3
      Conserved Domains (1) summary
      pfam03081
      Location:288660
      Exo70; Exo70 exocyst complex subunit
    5. NM_001378960.1NP_001365889.1  exocyst complex component 7 isoform 6

      Status: VALIDATED

      Source sequence(s)
      AL645861
      UniProtKB/TrEMBL
      Q3TIP4, Q7TPT3
      Related
      ENSMUST00000139699.8
      Conserved Domains (1) summary
      pfam03081
      Location:336701
      Exo70; Exo70 exocyst complex subunit
    6. NM_001378961.1NP_001365890.1  exocyst complex component 7 isoform 7

      Status: VALIDATED

      Source sequence(s)
      AL645861
      UniProtKB/TrEMBL
      Q3TIP4, Q7TPT3
      Conserved Domains (1) summary
      pfam03081
      Location:305670
      Exo70; Exo70 exocyst complex subunit
    7. NM_016857.4NP_058553.2  exocyst complex component 7 isoform 1

      See identical proteins and their annotated locations for NP_058553.2

      Status: VALIDATED

      Source sequence(s)
      AL645861
      Consensus CDS
      CCDS25664.1
      UniProtKB/Swiss-Prot
      O35250, Q8K121
      UniProtKB/TrEMBL
      Q3USE0, Q69ZS4
      Related
      ENSMUSP00000021147.8, ENSMUST00000021147.14
      Conserved Domains (1) summary
      pfam03081
      Location:313691
      Exo70; Exo70 exocyst complex subunit

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      116178823..116197574 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006533734.4XP_006533797.1  exocyst complex component 7 isoform X1

      UniProtKB/TrEMBL
      Q69ZS4
      Conserved Domains (1) summary
      pfam03081
      Location:305683
      Exo70; Exo70 exocyst complex subunit