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    GOLGA8T golgin A8 family member T [ Homo sapiens (human) ]

    Gene ID: 653075, updated on 3-Apr-2024

    Summary

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    Official Symbol
    GOLGA8Tprovided by HGNC
    Official Full Name
    golgin A8 family member Tprovided by HGNC
    Primary source
    HGNC:HGNC:44410
    See related
    Ensembl:ENSG00000261247 AllianceGenome:HGNC:44410
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to be involved in Golgi organization. Predicted to be active in Golgi cis cisterna; Golgi cisterna membrane; and cis-Golgi network. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in testis (RPKM 12.9), thyroid (RPKM 10.8) and 22 other tissues See more
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    Genomic context

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    See GOLGA8T in Genome Data Viewer
    Location:
    15q13.2
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (30135051..30148748)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (27922980..27940478)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (30427254..30440951)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene dynamin 1 pseudogene 28 Neighboring gene ULK4 pseudogene 3 Neighboring gene U8 small nucleolar RNA Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:30410195-30410695 Neighboring gene RNA, 7SL, cytoplasmic 469, pseudogene Neighboring gene dynamin 1 pseudogene 30 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:30459311-30459812 Neighboring gene uncharacterized LOC105370746

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in Golgi organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi cis cisterna IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in Golgi cisterna membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cis-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    golgin subfamily A member 8T

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355469.2 → NP_001342398.1  golgin subfamily A member 8T

      Status: VALIDATED

      Source sequence(s)
      AC120045
      Consensus CDS
      CCDS86440.1
      UniProtKB/Swiss-Prot
      H3BQL2
      UniProtKB/TrEMBL
      A0A1B0GVY7
      Related
      ENSP00000455826.1, ENST00000569052.2
      Conserved Domains (2) summary
      pfam15070
      Location:226 → 620
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
      cl25732
      Location:72 → 328
      SMC_N; RecF/RecN/SMC N terminal domain

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      30135051..30148748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024450032.2 → XP_024305800.1  golgin subfamily A member 8T isoform X1

      UniProtKB/TrEMBL
      A0A1B0GVY7
      Conserved Domains (2) summary
      COG1196
      Location:59 → 315
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam15070
      Location:213 → 607
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_011332701.1 Reference GRCh38.p14 PATCHES

      Range
      2303996..2321489
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054331809.1 → XP_054187784.1  golgin subfamily A member 8T isoform X2

    2. XM_054331808.1 → XP_054187783.1  golgin subfamily A member 8T isoform X1

    Reference GRCh38.p14 ALT_REF_LOCI_2

    Genomic

    1. NT_187660.1 Reference GRCh38.p14 ALT_REF_LOCI_2

      Range
      2416480..2433973
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054330037.1 → XP_054186012.1  golgin subfamily A member 8T isoform X2

    2. XM_054330036.1 → XP_054186011.1  golgin subfamily A member 8T isoform X1

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      27922980..27940478
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054378658.1 → XP_054234633.1  golgin subfamily A member 8T isoform X3

    2. XM_054378657.1 → XP_054234632.1  golgin subfamily A member 8T isoform X1

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_033933.1: Suppressed sequence

      Description
      NR_033933.1: This RefSeq was removed because there is insufficient support for the transcript.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    H3BQL2.1 GenPept UniProtKB/Swiss-Prot:H3BQL2

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