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    PAS_chr3_1216 uncharacterized protein [ Komagataella phaffii GS115 ]

    Gene ID: 8200445, updated on 23-Nov-2023

    Summary

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    Gene symbol
    PAS_chr3_1216
    Gene description
    uncharacterized protein
    Locus tag
    PAS_chr3_1216
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Komagataella phaffii GS115 (strain: GS115)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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    Genomic context

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    See PAS_chr3_1216 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_012965.1 (1431951..1433345)

    Chromosome 3 - NC_012965.1Genomic Context describing neighboring genes Neighboring gene Histone acetyltransferase critical for cell survival in the presence of DNA damage during S phase Neighboring gene Dynamin-related GTPase Neighboring gene Ser/Thr kinase involved in transcription and stress response Neighboring gene Protein involved in rRNA processing

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012965.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA lariat debranching enzyme activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of post-mRNA release spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012965.1 Reference assembly

      Range
      1431951..1433345
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002492935.1 → XP_002492980.1  uncharacterized protein PAS_chr3_1216 [Komagataella phaffii GS115]

      See identical proteins and their annotated locations for XP_002492980.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C4R5G5, F2QVH6
      Conserved Domains (3) summary
      pfam04676
      Location:399 → 458
      CwfJ_C_2; Protein similar to CwfJ C-terminus 2
      cl00228
      Location:205 → 337
      HIT_like; HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides. On the basis ...
      cl13995
      Location:66 → 151
      MPP_superfamily; metallophosphatase superfamily, metallophosphatase domain
    Nucleotide Protein
    Heading Accession and Version

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