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    RNA5SP405 RNA, 5S ribosomal pseudogene 405 [ Homo sapiens (human) ]

    Gene ID: 100873657, updated on 10-Oct-2023

    Summary

    Official Symbol
    RNA5SP405provided by HGNC
    Official Full Name
    RNA, 5S ribosomal pseudogene 405provided by HGNC
    Primary source
    HGNC:HGNC:43305
    See related
    Ensembl:ENSG00000199929 AllianceGenome:HGNC:43305
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    RN5S405
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    Genomic context

    See RNA5SP405 in Genome Data Viewer
    Location:
    16p12.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (26028912..26029025)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (26305306..26305419)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (26040233..26040346)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 4 Neighboring gene TNF receptor associated factor 7 pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr16:25855925-25856182 Neighboring gene Sharpr-MPRA regulatory region 8309 Neighboring gene NANOG hESC enhancer GRCh37_chr16:25896223-25896797 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr16:25899968-25901167 Neighboring gene NANOG hESC enhancer GRCh37_chr16:25959776-25960299 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr16:25961820-25962673 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr16:25962674-25963526 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:26055617-26055798 Neighboring gene microRNA 548w Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 3 Neighboring gene heat shock protein family E (Hsp10) member 1 pseudogene 16

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_033585.1 

      Range
      101..214
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      26028912..26029025
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      26305306..26305419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)