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    CG13949 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33266, updated on 26-Apr-2024

    Summary

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    Official Symbol
    CG13949provided by FlyBase
    Primary source
    FLYBASE:FBgn0031288
    Locus tag
    Dmel_CG13949
    See related
    AllianceGenome:FB:FBgn0031288
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:AT06839; Dmel\CG13949
    Summary
    Is expressed in embryonic/larval muscle system and embryonic/larval somatic muscle cell. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    21E2-21E2; 2-1.5 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (855337..856639)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (855337..856639)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene kraken Neighboring gene long non-coding RNA:CR45345 Neighboring gene mir-375 stem loop Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Computational identification of Drosophila microRNA genes. Lai EC, et al. Genome Biol, 2003. PMID 12844358, Free PMC Article
    2. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    3. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    4. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    5. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13949-PA
    CG13949-PB
    CG13949-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      855337..856639
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134708.2 → NP_608552.1  uncharacterized protein Dmel_CG13949, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608552.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T4I1, Q9VPU5
      Related
      FBpp0077682, FBtr0078017

    2. NM_001272920.1 → NP_001259849.1  uncharacterized protein Dmel_CG13949, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259849.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T4I1, Q9VPU5

    3. NM_001272919.1 → NP_001259848.1  uncharacterized protein Dmel_CG13949, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259848.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T4I1, Q9VPU5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8T4I1 Q8T4I1
    Q9VPU5 Q9VPU5

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