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    CLCP2 Charcot-Leyden crystal protein pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 100128145, updated on 10-Oct-2023

    Summary

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    Official Symbol
    CLCP2provided by HGNC
    Official Full Name
    Charcot-Leyden crystal protein pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:42536
    See related
    AllianceGenome:HGNC:42536
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LGALS10P1
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    Genomic context

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    Location:
    13q34
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (114306590..114307196)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (113515650..113516256)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (115072065..115072671)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370384 Neighboring gene microRNA 4502 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8062 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5559 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:115047057-115047744 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5561 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:115049711-115049907 Neighboring gene UPF3A regulator of nonsense mediated mRNA decay Neighboring gene uncharacterized LOC124903222 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:115057299-115057800 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:115057801-115058300 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8063 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8064 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:115060371-115060872 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8065 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5562 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8066 Neighboring gene Sharpr-MPRA regulatory region 14980 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5563 Neighboring gene chromosome alignment maintaining phosphoprotein 1 Neighboring gene long intergenic non-protein coding RNA 1054

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A primate subfamily of galectins expressed at the maternal-fetal interface that promote immune cell death. Than NG, et al. Proc Natl Acad Sci U S A, 2009 Jun 16. PMID 19497882, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Clone Names

    • KIAA1802

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_011415.1 

      Range
      101..707
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      114306590..114307196
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      113515650..113516256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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