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    LOC105379100 uncharacterized LOC105379100 [ Homo sapiens (human) ]

    Gene ID: 105379100, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC105379100
    Gene description
    uncharacterized LOC105379100
    See related
    Ensembl:ENSG00000249787
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105379100 in Genome Data Viewer
    Location:
    5q21.1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (100398497..100443723)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (100907135..100952039)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379101 Neighboring gene GUSB pseudogene 19 Neighboring gene FAM174A divergent transcript Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22841 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22842 Neighboring gene family with sequence similarity 174 member A Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22843

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      100398497..100443723
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007058884.1 RNA Sequence

    2. XR_007058886.1 RNA Sequence

    3. XR_948626.3 RNA Sequence

    4. XR_007058889.1 RNA Sequence

    5. XR_007058887.1 RNA Sequence

    6. XR_948624.3 RNA Sequence

    7. XR_007058888.1 RNA Sequence

    8. XR_948625.3 RNA Sequence

    9. XR_001742824.2 RNA Sequence

      Related
      ENST00000657549.1

    10. XR_007058885.1 RNA Sequence

    11. XR_948622.3 RNA Sequence

    12. XR_948623.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      100907135..100952039
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007075832.1 RNA Sequence

    2. XR_007075835.1 RNA Sequence

    3. XR_007075833.1 RNA Sequence

    4. XR_007075838.1 RNA Sequence

    5. XR_007075840.1 RNA Sequence

    6. XR_007075837.1 RNA Sequence

    7. XR_007075839.1 RNA Sequence

    8. XR_007075830.1 RNA Sequence

    9. XR_007075831.1 RNA Sequence

    10. XR_007075836.1 RNA Sequence

    11. XR_007075834.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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