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    LOC124906378 small nucleolar RNA U3 [ Homo sapiens (human) ]

    Gene ID: 124906378, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC124906378
    Gene description
    small nucleolar RNA U3
    See related
    Ensembl:ENSG00000202268
    Gene type
    snoRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC124906378 in Genome Data Viewer
    Location:
    3p21.31
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (45255409..45255620, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (45271775..45271986, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101928636 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:45256576-45257076 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:45257077-45257577 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14280 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14281 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:45281831-45282331 Neighboring gene transmembrane protein 158 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:45314637-45315836 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:45347576-45348076 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:45348077-45348577 Neighboring gene uncharacterized LOC105377061 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:45353949-45354510 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:45353385-45353948 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:45354511-45355074 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:45355075-45355636 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:45363491-45363991 Neighboring gene uncharacterized LOC105377062 Neighboring gene NANOG hESC enhancer GRCh37_chr3:45387482-45388007 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14282 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:45430895-45431470 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:45434289-45435488 Neighboring gene MPRA-validated peak4627 silencer Neighboring gene leucyl-tRNA synthetase 2, mitochondrial Neighboring gene ReSE screen-validated silencer GRCh37_chr3:45534631-45534827 Neighboring gene LARS2 antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:45549416-45550282

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      45255409..45255620 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007096342.1 RNA Sequence

      Related
      ENST00000365398.2

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      45271775..45271986 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007074197.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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