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    ANO7L1 anoctamin 7 like 1 (pseudogene) [ Homo sapiens (human) ]

    Gene ID: 101927546, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ANO7L1provided by HGNC
    Official Full Name
    anoctamin 7 like 1 (pseudogene)provided by HGNC
    Primary source
    HGNC:HGNC:32248
    See related
    AllianceGenome:HGNC:32248
    Gene type
    pseudo
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ANO7P1; TMEM16M; C1orf224
    Expression
    Broad expression in esophagus (RPKM 1.8), salivary gland (RPKM 1.1) and 23 other tissues See more
    Orthologs
    all
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    Genomic context

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    Location:
    1p36.13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (16215907..16226931, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (15657234..15668420, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene EPH receptor A2 Neighboring gene EPHA2 antisense RNA 1 Neighboring gene hESC enhancers GRCh37_chr1:16488540-16489068 and GRCh37_chr1:16489069-16489596 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16489597-16490124 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16490125-16490652 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16491605-16492545 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 324 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16494833-16495478 Neighboring gene Sharpr-MPRA regulatory region 6356 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16508387-16509367 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16510195-16510694 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16510785-16511286 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16511287-16511786 Neighboring gene Rho guanine nucleotide exchange factor 19 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 325 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 326 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16533787-16534760 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16534761-16535733 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16538951-16539649 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 327 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16542837-16543533 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 328 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 329 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16557534-16558362 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16563171-16563715 Neighboring gene ciliogenesis and planar polarity effector complex subunit 2 Neighboring gene metallothionein 1X pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Homology

    Other Names

    • anoctamin 7 pseudogene 1
    • anoctamin-4-like
    • transmembrane protein 16M

    Clone Names

    • FLJ33962

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      16215907..16226931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007065494.1 RNA Sequence

    2. XR_007065492.1 RNA Sequence

    3. XR_007065491.1 RNA Sequence

    4. XR_007065493.1 RNA Sequence

    5. XR_007065489.1 RNA Sequence

    6. XR_007065490.1 RNA Sequence

    7. XR_007065498.1 RNA Sequence

    8. XR_007065497.1 RNA Sequence

    9. XR_007065495.1 RNA Sequence

    10. XR_007065496.1 RNA Sequence

    11. XR_007065488.1 RNA Sequence

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791756.1 Reference GRCh38.p14 PATCHES

      Range
      20044..31222 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007069393.1 RNA Sequence

    2. XR_007069398.1 RNA Sequence

    3. XR_007069396.1 RNA Sequence

    4. XR_007069395.1 RNA Sequence

    5. XR_007069397.1 RNA Sequence

    6. XR_007069394.1 RNA Sequence

    7. XR_007069402.1 RNA Sequence

    8. XR_007069401.1 RNA Sequence

    9. XR_007069399.1 RNA Sequence

    10. XR_007069400.1 RNA Sequence

    11. XR_007069392.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      15657234..15668420 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007069881.1 RNA Sequence

    2. XR_007069886.1 RNA Sequence

    3. XR_007069884.1 RNA Sequence

    4. XR_007069883.1 RNA Sequence

    5. XR_007069885.1 RNA Sequence

    6. XR_007069882.1 RNA Sequence

    7. XR_007069890.1 RNA Sequence

    8. XR_007069889.1 RNA Sequence

    9. XR_007069887.1 RNA Sequence

    10. XR_007069888.1 RNA Sequence

    Nucleotide Protein
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