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    LINC02378 long intergenic non-protein coding RNA 2378 [ Homo sapiens (human) ]

    Gene ID: 105369678, updated on 10-Oct-2023

    Summary

    Official Symbol
    LINC02378provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2378provided by HGNC
    Primary source
    HGNC:HGNC:53301
    See related
    AllianceGenome:HGNC:53301
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC02378 in Genome Data Viewer
    Location:
    12p12.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (17581823..17589078, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (17458036..17465296, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (17734757..17742012, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:17535474-17536673 Neighboring gene proteasome 26S subunit, ATPase 1 pseudogene 8 Neighboring gene translocase of inner mitochondrial membrane 17B pseudogene 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26433 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26470 Neighboring gene VISTA enhancer hs605 Neighboring gene uncharacterized LOC124902888 Neighboring gene uncharacterized LOC124902889 Neighboring gene VISTA enhancer hs579 Neighboring gene microRNA 3974

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_146522.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC048352

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      17581823..17589078 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      17458036..17465296 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)