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    LINC02591 long intergenic non-protein coding RNA 2591 [ Homo sapiens (human) ]

    Gene ID: 388692, updated on 10-Oct-2023

    Summary

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    Official Symbol
    LINC02591provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2591provided by HGNC
    Primary source
    HGNC:HGNC:53901
    See related
    AllianceGenome:HGNC:53901
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in thyroid (RPKM 3.7), spleen (RPKM 3.2) and 23 other tissues See more
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    Genomic context

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    See LINC02591 in Genome Data Viewer
    Location:
    1q21.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (143792495..143797108)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (142864600..142869213)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (149287130..149291743)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 91 member A3, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:149285989-149286613 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:149286614-149287237 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:149287238-149287862 Neighboring gene RNA, U1 small nuclear 143, pseudogene Neighboring gene tRNA-Phe (anticodon GAA) 9-1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:149290176-149290676 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:149290677-149291177 Neighboring gene tRNA-Val (CAC) 8-1 Neighboring gene tRNA-Val (anticodon CAC) 4-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. p53-inducible long non-coding RNA PICART1 mediates cancer cell proliferation and migration. Cao Y, et al. Int J Oncol, 2017 May. PMID 28339031
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Markers

    Clone Names

    • FLJ13580, FLJ42559

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables triplet codon-amino acid adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_111933.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC239800

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      143792495..143797108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      142864600..142869213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001013644.2: Suppressed sequence

      Description
      NM_001013644.2: This RefSeq was removed because it is not thought that this locus is protein-coding

    2. NR_027002.1: Suppressed sequence

      Description
      NR_027002.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
    Nucleotide Protein
    Heading Accession and Version

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