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    Sycp1-ps1 synaptonemal complex protein 1, pseudogene 1 [ Mus musculus (house mouse) ]

    Gene ID: 20958, updated on 8-Feb-2024

    Summary

    Official Symbol
    Sycp1-ps1provided by MGI
    Official Full Name
    synaptonemal complex protein 1, pseudogene 1provided by MGI
    Primary source
    MGI:MGI:1098279
    See related
    Ensembl:ENSMUSG00000109116 AllianceGenome:MGI:1098279
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sycp1-rs
    Annotation information
    Note: This geneID was annotated on the wrong strand on NCBI's Build 37.1 in comparison to Sycp1 and available transcripts. [17 Jun 2014]
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    Genomic context

    See Sycp1-ps1 in Genome Data Viewer
    Location:
    7 A3; 7 9.31 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (18520227..18523339)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (18786302..18789414)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene pregnancy-specific beta-1-glycoprotein 22 Neighboring gene STARR-seq mESC enhancer starr_18174 Neighboring gene predicted gene, 24464 Neighboring gene STARR-seq mESC enhancer starr_18175 Neighboring gene pregnancy specific beta-1-glycoprotein 19 Neighboring gene carcinoembryonic antigen-related cell adhesion molecule 1 pseudogene Neighboring gene pregnancy specific beta-1-glycoprotein 17

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024208.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC149065
      Related
      ENSMUST00000207882.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      18520227..18523339
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_001465.1: Suppressed sequence

      Description
      NG_001465.1: This RefSeq was permanently suppressed because it contains sequence from the wrong strand.