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    Srrm4os serine/arginine repetitive matrix 4, opposite strand [ Mus musculus (house mouse) ]

    Gene ID: 76798, updated on 8-Feb-2024

    Summary

    Official Symbol
    Srrm4osprovided by MGI
    Official Full Name
    serine/arginine repetitive matrix 4, opposite strandprovided by MGI
    Primary source
    MGI:MGI:1924048
    See related
    Ensembl:ENSMUSG00000086219 AllianceGenome:MGI:1924048
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2410137F16Rik
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Srrm4os in Genome Data Viewer
    Location:
    5 F; 5 56.45 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (116576781..116603546)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (116438722..116465487)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_14153 Neighboring gene predicted gene, 36841 Neighboring gene heat shock protein 8 Neighboring gene predicted gene, 42009 Neighboring gene serine/arginine repetitive matrix 4 Neighboring gene STARR-seq mESC enhancer starr_14160 Neighboring gene glutathione S-transferase mu 2 (muscle), pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_14161 Neighboring gene STARR-seq mESC enhancer starr_14162 Neighboring gene predicted gene, 29843

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Other Names

    • Srrm4 opposite strand transcript

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_015595.3 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC115972, AK049160
      Related
      ENSMUST00000126959.5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      116576781..116603546
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)