U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Calml3 calmodulin-like 3 [ Mus musculus (house mouse) ]

    Gene ID: 70405, updated on 11-Apr-2024

    Summary

    Official Symbol
    Calml3provided by MGI
    Official Full Name
    calmodulin-like 3provided by MGI
    Primary source
    MGI:MGI:1917655
    See related
    Ensembl:ENSMUSG00000063130 AllianceGenome:MGI:1917655
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2310068O22Rik
    Summary
    Predicted to enable calcium ion binding activity and enzyme regulator activity. Orthologous to human CALML3 (calmodulin like 3). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Calml3 in Genome Data Viewer
    Location:
    13 A1; 13 2.13 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (3852893..3854318, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (3802893..3804318, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 35190 Neighboring gene VISTA enhancer mm41 Neighboring gene STARR-seq mESC enhancer starr_33491 Neighboring gene STARR-seq mESC enhancer starr_33492 Neighboring gene STARR-seq mESC enhancer starr_33493 Neighboring gene predicted gene, 53803 Neighboring gene predicted gene, 40655 Neighboring gene calmodulin 4

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables calcium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in positive regulation of ryanodine-sensitive calcium-release channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027416.3NP_081692.1  calmodulin-like protein 3

      See identical proteins and their annotated locations for NP_081692.1

      Status: VALIDATED

      Source sequence(s)
      AK010118, BB144976, BX516975, EL960451
      Consensus CDS
      CCDS26214.1
      UniProtKB/Swiss-Prot
      Q99K52, Q9D6P8
      Related
      ENSMUSP00000076880.4, ENSMUST00000077698.5
      Conserved Domains (1) summary
      PTZ00184
      Location:1149
      PTZ00184; calmodulin; Provisional

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      3852893..3854318 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)