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    CCDC34P1 coiled-coil domain containing 34 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100288584, updated on 10-Oct-2023

    Summary

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    Official Symbol
    CCDC34P1provided by HGNC
    Official Full Name
    coiled-coil domain containing 34 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:44008
    See related
    Ensembl:ENSG00000250556 AllianceGenome:HGNC:44008
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    4q25
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (112068006..112068528)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (115376364..115376886)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (112989162..112989684)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377367 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72110 Neighboring gene VISTA enhancer hs926 Neighboring gene NANOG hESC enhancer GRCh37_chr4:112729243-112729823 Neighboring gene long intergenic non-protein coding RNA 2945 Neighboring gene uncharacterized LOC105377369 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15631 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15632 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:112982078-112982291 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21819 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:113003830-113005029 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:113007923-113008491 Neighboring gene tubulin beta 8 class VIII pseudogene 3 Neighboring gene ribosomal protein S12 pseudogene 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022070.1 

      Range
      101..623
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      112068006..112068528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      115376364..115376886
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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