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    SURF6P1 surfeit 6 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 643470, updated on 10-Oct-2023

    Summary

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    Official Symbol
    SURF6P1provided by HGNC
    Official Full Name
    surfeit 6 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:37722
    See related
    AllianceGenome:HGNC:37722
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    Yq11.222
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (17184491..17194771)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (18091008..18101289)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (19296371..19306651)

    Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 109, pseudogene Neighboring gene RNA, U6 small nuclear 184, pseudogene Neighboring gene MED14-independent group 3 enhancer GRCh37_chrY:19155795-19156994 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrY:19177943-19178550 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrY:19178551-19179158 Neighboring gene elongin C pseudogene 35 Neighboring gene family with sequence similarity 41 member A, Y-linked 1 Neighboring gene tubulin beta 1 class VI pseudogene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_016547.3 

      Range
      101..10381
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

      Range
      17184491..17194771
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060948.1 Alternate T2T-CHM13v2.0

      Range
      18091008..18101289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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