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    LYARP1 Ly1 antibody reactive pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100420968, updated on 10-Oct-2023

    Summary

    Official Symbol
    LYARP1provided by HGNC
    Official Full Name
    Ly1 antibody reactive pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:50747
    See related
    AllianceGenome:HGNC:50747
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    Location:
    2p12
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (82268738..82269680, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (82268974..82269916, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (82495862..82496804, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene RNA, 7SL, cytoplasmic 201, pseudogene Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:82232537-82233101 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:82233102-82233665 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:82240833-82241354 Neighboring gene MPRA-validated peak3756 silencer Neighboring gene MPRA-validated peak3758 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:82426264-82426779 Neighboring gene RNA, U6 small nuclear 685, pseudogene Neighboring gene MPRA-validated peak3761 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:82625391-82625915 Neighboring gene uncharacterized LOC124906132 Neighboring gene RBX1 pseudogene 1

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_023577.1 

      Range
      101..1043
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      82268738..82269680 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      82268974..82269916 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)