U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC132386 epithelial cell adhesion molecule pseudogene [ Homo sapiens (human) ]

    Gene ID: 132386, updated on 10-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC132386
    Gene description
    epithelial cell adhesion molecule pseudogene
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    4q34.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (181522660..181523421)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (184864829..184865591)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (182443813..182444574)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:182199870-182200513 Neighboring gene NANOG hESC enhancer GRCh37_chr4:182230025-182230542 Neighboring gene long intergenic non-protein coding RNA 2500 Neighboring gene NANOG hESC enhancer GRCh37_chr4:182271856-182272545 Neighboring gene uncharacterized LOC107986205 Neighboring gene uncharacterized LOC124900822 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:182353242-182353742 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:182470028-182471227 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:182509195-182509349 Neighboring gene teneurin transmembrane protein 3 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:182544780-182545979 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:182717259-182718458 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22173 Neighboring gene TENM3 antisense transcript 2 Neighboring gene RN7SK pseudogene 13

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

    Go to the top of the page Help

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002364.3 

      Range
      101..862
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      181522660..181523421
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      184864829..184865591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases