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    PRSS52P serine protease 52, pseudogene [ Homo sapiens (human) ]

    Gene ID: 100419209, updated on 8-Nov-2023

    Summary

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    Official Symbol
    PRSS52Pprovided by HGNC
    Official Full Name
    serine protease 52, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:37322
    See related
    Ensembl:ENSG00000285237 AllianceGenome:HGNC:37322
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    8p23.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (10474789..10475045, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (9264116..9264372)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (10332299..10332555, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene methionine sulfoxide reductase A Neighboring gene uncharacterized LOC124901886 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26989 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:10109393-10109588 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26990 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26991 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:10191156-10191980 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:10191981-10192805 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr8:10194133-10194989 Neighboring gene transmembrane protein 126A pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr8:10214030-10214233 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10273265-10274127 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:10275622-10276144 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10280427-10280927 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:10282861-10283372 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:10283373-10283882 Neighboring gene uncharacterized LOC124901887 Neighboring gene long intergenic non-protein coding RNA 3022 Neighboring gene RNA, U6 small nuclear 729, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26992 Neighboring gene serine protease 51 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10382638-10383436 Neighboring gene serine protease 55

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. Comuzzie AG, et al. PLoS One, 2012. PMID 23251661, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    EBI GWAS Catalog

    Description
    Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
    EBI GWAS Catalog

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • protease, serine 52, pseudogene
    • protease, serine, 55 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_025997.2 

      Range
      101..357
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      10474789..10475045 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_018654717.1 Reference GRCh38.p14 PATCHES

      Range
      2871964..2872220
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      9264116..9264372
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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