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USP12P1 USP12 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 9959, updated on 10-Oct-2023

Summary

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Official Symbol
USP12P1provided by HGNC
Official Full Name
USP12 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:12610
See related
AllianceGenome:HGNC:12610
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
UBH1; USP12
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Genomic context

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Location:
5q35.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (171251643..171253966)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (171791986..171794309)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (170678647..170680970)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene RAN binding protein 17 Neighboring gene tubulin epsilon 1 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:170329817-170330318 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:170330319-170330818 Neighboring gene VISTA enhancer hs608 Neighboring gene VISTA enhancer hs693 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:170516153-170516720 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:170530424-170531252 Neighboring gene uncharacterized LOC124901133 Neighboring gene VISTA enhancer hs278 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:170666590-170667789 Neighboring gene uncharacterized LOC124901217 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:170720541-170721740 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:170734859-170735743 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:170735744-170736629 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:170736630-170737514 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:170737515-170738400 Neighboring gene T cell leukemia homeobox 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An evolutionarily conserved gene on human chromosome 5q33-q34, UBH1, encodes a novel deubiquitinating enzyme. Hansen-Hagge TE, et al. Genomics, 1998 May 1. PMID 9615226
  2. WDR20 regulates activity of the USP12 x UAF1 deubiquitinating enzyme complex. Kee Y, et al. J Biol Chem, 2010 Apr 9. PMID 20147737, Free PMC Article
  3. Human and mouse proteases: a comparative genomic approach. Puente XS, et al. Nat Rev Genet, 2003 Jul. PMID 12838346

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Other Names

  • ubiquitin hydrolysing enzyme 1
  • ubiquitin specific peptidase 12 pseudogene 1
  • ubiquitin specific protease 12 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002822.5 

    Range
    101..2424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    171251643..171253966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    171791986..171794309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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