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XAGE1D X antigen family, member 1D [ Homo sapiens (human) ]

Gene ID: 9503, discontinued on 12-Apr-2014

Summary

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Official Symbol
XAGE1Dprovided by HGNC
Official Full Name
X antigen family, member 1Dprovided by HGNC
Primary source
HGNC:HGNC:21508
See related
MIM:300289
Gene type
protein coding
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CTP9; CT12.1; CT12.1D
Summary
This gene is a member of the XAGE subfamily, which belongs to the GAGE family. The GAGE genes are expressed in a variety of tumors and in some fetal and reproductive tissues. This gene is strongly expressed in Ewing's sarcoma, alveolar rhabdomyosarcoma and normal testis. The protein encoded by this gene contains a nuclear localization signal and shares a sequence similarity with other GAGE/PAGE proteins. Because of the expression pattern and the sequence similarity, this protein also belongs to a family of CT (cancer-testis) antigens. Alternative splicing of this gene, in addition to alternative transcription start sites, results in multiple transcript variants. [provided by RefSeq, Jan 2010]
Annotation information
Note: There are multiple XAGE1 loci on the X chromosome. This location, previously annotated as XAGE1, is officially named XAGE1D. [20 Jun 2007]
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Genomic context

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See XAGE1D in Genome Data Viewer
Location:
Xp11.22
Exon count:
4
Annotation release Status Assembly Chr Location
105 latest, but not current GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (52528159..52533303, complement)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000023.10 chromosome X reference GRCh37.p13 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General protein information

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Names
X antigen family, member 1D
G antigen family D member 2
X antigen family member 1
cancer/testis antigen 12.1
cancer/testis antigen family 12, member 1d
cancer/testis associated protein
protein XAGE-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 105 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh37.p13 Primary Assembly

Genomic

  1. NC_000023.10 Reference GRCh37.p13 Primary Assembly

    Range
    52528159..52533303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_020411.2 → NP_065144.2  

  2. NM_133430.2 → NP_597673.1  

RNA

  1. NR_033256.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9HD64.3 GenPept UniProtKB/Swiss-Prot:Q9HD64

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
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