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SNORD46 small nucleolar RNA, C/D box 46 [ Homo sapiens (human) ]

Gene ID: 94161, updated on 4-Jan-2025

Summary

Official Symbol
SNORD46provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 46provided by HGNC
Primary source
HGNC:HGNC:10186
See related
Ensembl:ENSG00000200913 AllianceGenome:HGNC:10186
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U40; U46; RNU40; RNU46
Summary
Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See SNORD46 in Genome Data Viewer
Location:
1p34.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (44776492..44776589)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (44647481..44647578)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (45242164..45242261)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene kinesin family member 2C Neighboring gene small nucleolar RNA, C/D box 160 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 817 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 945 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:45243410-45243921 Neighboring gene small nucleolar RNA, C/D box 55 Neighboring gene ribosomal protein S8 Neighboring gene small nucleolar RNA, C/D box 38A Neighboring gene small nucleolar RNA, C/D box 38B

Genomic regions, transcripts, and products

General gene information

Other Names

  • RNA, U40 small nuclear
  • RNA, U40 small nucleolar
  • RNA, U46 small nuclear
  • U40 small nucleolar RNA
  • U40 snoRNA

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing  
Component Evidence Code Pubs
located_in nucleolus  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_000024.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    X96646
    Related
    ENST00000364043.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    44776492..44776589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    44647481..44647578
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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