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Mrpl36 mitochondrial ribosomal protein L36 [ Mus musculus (house mouse) ]

Gene ID: 94066, updated on 5-Mar-2024

Summary

Official Symbol
Mrpl36provided by MGI
Official Full Name
mitochondrial ribosomal protein L36provided by MGI
Primary source
MGI:MGI:2137228
See related
Ensembl:ENSMUSG00000021607 AllianceGenome:MGI:2137228
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosome biogenesis. Predicted to act upstream of or within translation. Located in mitochondrion. Is expressed in several structures, including early conceptus; gonad; heart; liver; and metanephros. Orthologous to human MRPL36 (mitochondrial ribosomal protein L36). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 76.0), duodenum adult (RPKM 61.4) and 28 other tissues See more
Orthologs
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Genomic context

Location:
13 C1; 13 39.71 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (73479128..73480297)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (73328503..73332178)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_34990 Neighboring gene 40S ribosomal protein S28 pseudogene Neighboring gene NADH:ubiquinone oxidoreductase core subunit S6 Neighboring gene STARR-seq mESC enhancer starr_34991 Neighboring gene ephemeron, early developmental lncRNA Neighboring gene STARR-seq mESC enhancer starr_34992 Neighboring gene lysophosphatidylcholine acyltransferase 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables structural constituent of ribosome ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in mitochondrial translation NAS
Non-traceable Author Statement
more info
PubMed 
acts_upstream_of_or_within translation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in mitochondrial inner membrane NAS
Non-traceable Author Statement
more info
PubMed 
part_of mitochondrial large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of mitochondrial large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
part_of mitochondrial large ribosomal subunit NAS
Non-traceable Author Statement
more info
PubMed 
located_in mitochondrion HDA PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in nuclear body ISO
Inferred from Sequence Orthology
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
large ribosomal subunit protein bL36m
Names
39S ribosomal protein L36, mitochondrial
L36mt
MRP-L36

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_053163.1NP_444393.1  large ribosomal subunit protein bL36m

    See identical proteins and their annotated locations for NP_444393.1

    Status: PROVISIONAL

    Source sequence(s)
    BC009166
    Consensus CDS
    CCDS26631.1
    UniProtKB/Swiss-Prot
    Q3V2T6, Q99N90
    Related
    ENSMUSP00000022098.9, ENSMUST00000022098.10
    Conserved Domains (1) summary
    pfam00444
    Location:65102
    Ribosomal_L36; Ribosomal protein L36

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    73479128..73480297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)